Parental gene: | PTPN2, ENSETEG00000005577 |
| Aliases: | None |
| Description: | protein tyrosine phosphatase, non-receptor type 2 [Source:HGNC Symbol;Acc:9650] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_7151:635..145779(-) |
>ENSETEG00000005577
ATGTCCGTCACCCTGGAGCGGGAGTTTGAGGAAATGGATACTCAGAATTGCTGGNNNNNNNNNNNNNNNGAAATTCGAAA
TGAGTCCCATGACTATCCTCATAGAGTGGCCAAGTTTCCAGAAAACAGAAATCGAAACAGATACAGAGATGTGAGCCCAT
ATGATCACAGTCGTGTTACACTGCAAAGTACTGAAAATGATTATATTAATGCCAGTTTAGTTGACATAGAAGAGGCACAA
AGGAGTTACATCTTAACACAGGGTCCACTTCCTAATACATGTTGTCATTTCTGGCTCATGGTTTGGCAGCAAAAAACAAA
AGCCATTGTCATGCTAAACCGGGTTGTGGAGAAAGAATCGGTTAAATGTGCACAGTACTGGCCAACAAAAGATGACCGAG
AGGTGCTGTTTAAAGAAACAGGATTCAGTGTGAAGCTCTTAACAGAAGATGTGAAATCATACTATACAGTACATCTACTG
CAATTAGAAAATATCAATAGTGGTGAAACCAGAACAATCTCTCACTTTCATTATACCACCTGGCCAGATTTTGGAGTCCC
TGAATCACCAGCTTCATTTCTCAATTTCTTATTTAAAGTGAGAGAATCTGGCTCCTTGAAAGCTGAGCATGGACCTGTGG
TGGTTCACTGCAGTGCTGGTATTGGGCGGTCTGGCACATTTTCCTTAGTAGACACCTGTCTTATTTTGCTGGAAAAAGGA
AATGATATTAATATTAAACAAGTGCTGCTGAATATGAGAAAATTTCGAATGGGACTTATTCAGACACCAGATCAACTCAG
ATTCTCATACATGGCTATGATAGAAGGAGCAAAGTTTATAAAGGGAGACAATATACAGAAACGATGGAAAGAACTATCTA
AGGAAGACTTGTCCCCAGCTTTTGATCATTCACCAACCAAAATAATGACTGAAAAATATAATGGGAACAGAATAGCCTTA
GAAGAAGGAAAACTTGCAGGTGACAGGTGTTCAGGACTGTCCTCTAAAATACAAGAAACTGTAGAGGAAAGGAGCGAGAG
TGTTTTACGGAAACGAGTCCGAGAGGACAGAAAAGCTAACACGGCTCAGAAGGTGCAGCAGATGAAACAGAGGCTAAATG
AGACTGAACGAAAAAGAAAAAGGTGGTTATATTGGCAACCTATTTTCACTAAGATCGGGTTTGTGTCAGTCCTTTTGGTT
GGAGCTTTTGTTGGCTGGACACTGTTTTTTCAGCAAAATGCCCTGTAA
ATGTCCGTCACCCTGGAGCGGGAGTTTGAGGAAATGGATACTCAGAATTGCTGGNNNNNNNNNNNNNNNGAAATTCGAAA
TGAGTCCCATGACTATCCTCATAGAGTGGCCAAGTTTCCAGAAAACAGAAATCGAAACAGATACAGAGATGTGAGCCCAT
ATGATCACAGTCGTGTTACACTGCAAAGTACTGAAAATGATTATATTAATGCCAGTTTAGTTGACATAGAAGAGGCACAA
AGGAGTTACATCTTAACACAGGGTCCACTTCCTAATACATGTTGTCATTTCTGGCTCATGGTTTGGCAGCAAAAAACAAA
AGCCATTGTCATGCTAAACCGGGTTGTGGAGAAAGAATCGGTTAAATGTGCACAGTACTGGCCAACAAAAGATGACCGAG
AGGTGCTGTTTAAAGAAACAGGATTCAGTGTGAAGCTCTTAACAGAAGATGTGAAATCATACTATACAGTACATCTACTG
CAATTAGAAAATATCAATAGTGGTGAAACCAGAACAATCTCTCACTTTCATTATACCACCTGGCCAGATTTTGGAGTCCC
TGAATCACCAGCTTCATTTCTCAATTTCTTATTTAAAGTGAGAGAATCTGGCTCCTTGAAAGCTGAGCATGGACCTGTGG
TGGTTCACTGCAGTGCTGGTATTGGGCGGTCTGGCACATTTTCCTTAGTAGACACCTGTCTTATTTTGCTGGAAAAAGGA
AATGATATTAATATTAAACAAGTGCTGCTGAATATGAGAAAATTTCGAATGGGACTTATTCAGACACCAGATCAACTCAG
ATTCTCATACATGGCTATGATAGAAGGAGCAAAGTTTATAAAGGGAGACAATATACAGAAACGATGGAAAGAACTATCTA
AGGAAGACTTGTCCCCAGCTTTTGATCATTCACCAACCAAAATAATGACTGAAAAATATAATGGGAACAGAATAGCCTTA
GAAGAAGGAAAACTTGCAGGTGACAGGTGTTCAGGACTGTCCTCTAAAATACAAGAAACTGTAGAGGAAAGGAGCGAGAG
TGTTTTACGGAAACGAGTCCGAGAGGACAGAAAAGCTAACACGGCTCAGAAGGTGCAGCAGATGAAACAGAGGCTAAATG
AGACTGAACGAAAAAGAAAAAGGTGGTTATATTGGCAACCTATTTTCACTAAGATCGGGTTTGTGTCAGTCCTTTTGGTT
GGAGCTTTTGTTGGCTGGACACTGTTTTTTCAGCAAAATGCCCTGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000867 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005102 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000016588 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000005636 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000175354 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010259 | ortholog_one2many | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000011818 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005156 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000021422 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009074 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028605 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008983 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000009884 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_1743 | 82.82 | 54.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1942 | 68.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000005577 retrocopies