Parental gene:

PLP2, ENSFCAG00000003820

Aliases:None
Description:proteolipid protein 2 (colonic epithelium-enriched) [Source:HGNC Symbol;Acc:9087]
Organism:Cat (Felis catus)
Coordinates:X:42163183..42166087(+)


>ENSFCAG00000003820
ATGGCGGATTCCGAGCGCCTCTCGGCTCCCGGCTGCTGGGCCGCCTGCACCAACTTTTCGCGCACCCGAAAAGGAATTCT
CCTGTTGGCTGAGATTATATTTTGCTTGGTGATTCTGATCTGCTTCAGTGCCTCCACACCGGGATACTCCTCCCTGTCGG
TGGTTGAAATGATCCTTGCTACTATCTTCTTTGTCATCTACATGTGTGACCTGCACACTAAGATACAGATCATCAACTGG
CCTTGGAGTGATTTCTTCCGAACCCTCATAGCGGCCATCCTCTACCTGATCACCTCCATTGTTGTCCTGGTTGAGAGAGG
AAATGCCTCCAAAATCATCGCAGGGGTACTGGGCCTAATTGTCTCATGCCTCTTTGGCTATGATGCCTACATCACTTTCC
CCTTGCGGCAGCAAAGACATACAGCAGCCCCTACTGACCCTGCAGATGGCCCGGTGTAG

Library Parental gene expression (RPM)
SRP017611_liver 4 .95 RPM
SRP017611_kidney 26 .07 RPM
SRP017611_brain 3 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012288 ortholog_one2one 1 retrogene
retro_amel_1129,
Bos taurus ENSBTAG00000016093 ortholog_one2one 3 retrogenes
retro_btau_1574, retro_btau_73, retro_btau_810,
Canis familiaris ENSCAFG00000015798 ortholog_one2one 1 retrogene
retro_cfam_933,
Homo sapiens ENSG00000102007 ortholog_one2one 1 retrogene
retro_hsap_3411,
Loxodonta africana ENSLAFG00000004483 ortholog_one2one 1 retrogene
retro_lafr_427,
Macaca mulatta ENSMMUG00000023022 ortholog_one2one 1 retrogene
retro_mmul_2124,
Mustela putorius furo ENSMPUG00000013817 ortholog_one2one 3 retrogenes
retro_mputfur_107, retro_mputfur_462, retro_mputfur_969,
Mus musculus ENSMUSG00000031146 possible_ortholog 1 retrogene
retro_mmus_94,
Nomascus leucogenys ENSNLEG00000001317 ortholog_one2one 1 retrogene
retro_nleu_2887,
Otolemur garnettii ENSOGAG00000003865 ortholog_one2one 3 retrogenes
retro_ogar_2568, retro_ogar_2865, retro_ogar_473,
Pan troglodytes ENSPTRG00000021885 ortholog_one2one 1 retrogene
retro_ptro_2316,
Tursiops truncatus ENSTTRG00000016968 ortholog_one2one 2 retrogenes
retro_ttru_1586, retro_ttru_767,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_256 78.85 67.76
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_fcat_1547 67.46 80.92
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000003820 retrocopies