Parental gene:

PLP2, ENSBTAG00000016093

Aliases:None
Description:Proteolipid protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6Y1E2]
Organism:Cow (Bos taurus)
Coordinates:X:92294751..92297791(+)


>ENSBTAG00000016093
ATGGCGGATTCCGAGCGCCTCACGGCTCCCGGCTGCTGGGCCGCCTGCACCAGCTTCTCGCGCACCCGAAAGGGATTTCT
TCTGTTTGCTGAGATTATACTATGCCTGGTGATTCTGATCTGCTTTAGCACCTCGACATCAGGGTACTCTTTCTTGTCGG
TGATAGAGATGATCTTTGCCGCCATCTTTTTTGTTGTCTACATGTGTGACCTGCACACCAAGATACAGATCATCAACTGG
CCTTGGAGTGATTTCTTCCGAACCCTTGTAGCGGCCATTCTCTACCTGATCACCTCCATTGTGGTGCTCGTTGAGAGAGG
AAACGGCTCCAAAATCGCTGCAGGGGCGCTGGGCCTATGCGCTGCAGGCCTCTTTGGCTATGATGCCTACATTACCTTCC
CCTTGCGGCAGCAGAGACATACAGCAGCCCCTACTGATCCTGCAGATGGCCCGGTGTAG

Library Parental gene expression (RPM)
ERP005899_liver 2 .52 RPM
ERP005899_muscle 59 .60 RPM
SRP017611_brain 5 .71 RPM
SRP017611_kidney 21 .52 RPM
SRP017611_liver 2 .27 RPM
SRP030211_testis 3 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012288 ortholog_one2one 1 retrogene
retro_amel_1129,
Bos taurus ENSBTAG00000047654 within_species_paralog 1 retrogene
retro_btau_1771,
Canis familiaris ENSCAFG00000015798 ortholog_one2one 1 retrogene
retro_cfam_933,
Felis catus ENSFCAG00000003820 ortholog_one2one 2 retrogenes
retro_fcat_1547, retro_fcat_256,
Homo sapiens ENSG00000102007 ortholog_one2one 1 retrogene
retro_hsap_3411,
Loxodonta africana ENSLAFG00000004483 ortholog_one2many 1 retrogene
retro_lafr_427,
Macaca mulatta ENSMMUG00000023022 ortholog_one2one 1 retrogene
retro_mmul_2124,
Mustela putorius furo ENSMPUG00000013817 ortholog_one2one 3 retrogenes
retro_mputfur_107, retro_mputfur_462, retro_mputfur_969,
Mus musculus ENSMUSG00000031146 possible_ortholog 1 retrogene
retro_mmus_94,
Nomascus leucogenys ENSNLEG00000001317 ortholog_one2one 1 retrogene
retro_nleu_2887,
Otolemur garnettii ENSOGAG00000003865 ortholog_one2one 3 retrogenes
retro_ogar_2568, retro_ogar_2865, retro_ogar_473,
Pan troglodytes ENSPTRG00000021885 ortholog_one2one 1 retrogene
retro_ptro_2316,
Rattus norvegicus ENSRNOG00000039496 possible_ortholog 1 retrogene
retro_rnor_2686,
Tursiops truncatus ENSTTRG00000016968 ortholog_one2one 2 retrogenes
retro_ttru_1586, retro_ttru_767,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_73 68.55 81.58
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2. retro_btau_810 82.35 55.92
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3. retro_btau_1574 52.63 72.37
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Download FASTA sequences of all ENSBTAG00000016093 retrocopies