Parental gene:

PSMB3, ENSFCAG00000014497

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 3 [Source:HGNC Symbol;Acc:9540]
Organism:Cat (Felis catus)
Coordinates:E1:40073083..40082732(+)


>ENSFCAG00000014497
ATGTCTATTATGTCCTATAACGGAGGGGCCGTCATGGCCATGAAGGGGAAGAACTGTGTGGCCATCGCTGCCGACAGGCG
CTTCGGGATCCAGGCCCAGATGGTGACCACGGACTTCCAGAAGATCTTTCCCATGGGCGATCGGCTGTACATAGGCCTGG
CCGGACTGGCCACCGATGTCCAGACTGTTGCCCAGCGCCTCAAGTTCCGGCTGAACCTGTATGAGCTGAAGGAAGGTCGG
CAGATCAAGCCTTACACCCTCATGAGCATGGTGGCCAACCTCTTGTATGAGAAACGGTTTGGCCCCTACTACACAGAGCC
AGTCATCGCCGGGTTGGACCCGAAGACCTTCAAGCCCTTCATCTGCTCCCTAGACCTCATCGGCTGCCCCATGGTGACTG
ACGACTTTGTGGTCAGCGGCACCTGCTCCGAACAAATGTATGGGATGTGCGAGTCCCTCTGGGAGCCCAACATGGATCCA
GAACACCTGTTTGAAACCATCTCACAAGCCATGCTGAATGCCGTGGATCGGGATGCAGTGTCAGGCATGGGAGTCATTGT
CCACGTCATTGAGAAGGACAGGATTACCACCAGGACACTGAAGGCCCGCATGGACTAA

Library Parental gene expression (RPM)
SRP017611_brain 17 .22 RPM
SRP017611_kidney 28 .55 RPM
SRP017611_liver 16 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004363 ortholog_one2one 1 retrogene
retro_amel_619,
Canis familiaris ENSCAFG00000016587 ortholog_one2one 2 retrogenes
retro_cfam_135, retro_cfam_532,
Erinaceus europaeus ENSEEUG00000015275 possible_ortholog 1 retrogene
retro_eeur_10,
Gorilla gorilla ENSGGOG00000007067 possible_ortholog 2 retrogenes
retro_ggor_103, retro_ggor_876,
Loxodonta africana ENSLAFG00000002233 possible_ortholog 1 retrogene
retro_lafr_70,
Macropus eugenii ENSMEUG00000004131 ortholog_one2one 2 retrogenes
retro_meug_1804, retro_meug_551,
Macaca mulatta ENSMMUG00000012363 possible_ortholog 1 retrogene
retro_mmul_868,
Monodelphis domestica ENSMODG00000012614 ortholog_one2one 2 retrogenes
retro_mdom_1722, retro_mdom_1812,
Mus musculus ENSMUSG00000069744 ortholog_one2many 8 retrogenes
retro_mmus_1449, retro_mmus_1551, retro_mmus_1790, retro_mmus_1938, retro_mmus_2110, retro_mmus_41, retro_mmus_46, retro_mmus_536,
Rattus norvegicus ENSRNOG00000012938 possible_ortholog 7 retrogenes
retro_rnor_1016, retro_rnor_2094, retro_rnor_2448, retro_rnor_2537, retro_rnor_2804, retro_rnor_743, retro_rnor_8,
Tupaia belangeri ENSTBEG00000013010 ortholog_one2one 2 retrogenes
retro_tbel_1387, retro_tbel_2693,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_784 77.40 70.73
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2. retro_fcat_1270 67.05 83.41
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3. retro_fcat_1442 77.29 99.02
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Download FASTA sequences of all ENSFCAG00000014497 retrocopies