Parental gene: | PSMB3, ENSFCAG00000014497 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) subunit, beta type, 3 [Source:HGNC Symbol;Acc:9540] |
| Organism: | Cat (Felis catus) |
| Coordinates: | E1:40073083..40082732(+) |
>ENSFCAG00000014497
ATGTCTATTATGTCCTATAACGGAGGGGCCGTCATGGCCATGAAGGGGAAGAACTGTGTGGCCATCGCTGCCGACAGGCG
CTTCGGGATCCAGGCCCAGATGGTGACCACGGACTTCCAGAAGATCTTTCCCATGGGCGATCGGCTGTACATAGGCCTGG
CCGGACTGGCCACCGATGTCCAGACTGTTGCCCAGCGCCTCAAGTTCCGGCTGAACCTGTATGAGCTGAAGGAAGGTCGG
CAGATCAAGCCTTACACCCTCATGAGCATGGTGGCCAACCTCTTGTATGAGAAACGGTTTGGCCCCTACTACACAGAGCC
AGTCATCGCCGGGTTGGACCCGAAGACCTTCAAGCCCTTCATCTGCTCCCTAGACCTCATCGGCTGCCCCATGGTGACTG
ACGACTTTGTGGTCAGCGGCACCTGCTCCGAACAAATGTATGGGATGTGCGAGTCCCTCTGGGAGCCCAACATGGATCCA
GAACACCTGTTTGAAACCATCTCACAAGCCATGCTGAATGCCGTGGATCGGGATGCAGTGTCAGGCATGGGAGTCATTGT
CCACGTCATTGAGAAGGACAGGATTACCACCAGGACACTGAAGGCCCGCATGGACTAA
ATGTCTATTATGTCCTATAACGGAGGGGCCGTCATGGCCATGAAGGGGAAGAACTGTGTGGCCATCGCTGCCGACAGGCG
CTTCGGGATCCAGGCCCAGATGGTGACCACGGACTTCCAGAAGATCTTTCCCATGGGCGATCGGCTGTACATAGGCCTGG
CCGGACTGGCCACCGATGTCCAGACTGTTGCCCAGCGCCTCAAGTTCCGGCTGAACCTGTATGAGCTGAAGGAAGGTCGG
CAGATCAAGCCTTACACCCTCATGAGCATGGTGGCCAACCTCTTGTATGAGAAACGGTTTGGCCCCTACTACACAGAGCC
AGTCATCGCCGGGTTGGACCCGAAGACCTTCAAGCCCTTCATCTGCTCCCTAGACCTCATCGGCTGCCCCATGGTGACTG
ACGACTTTGTGGTCAGCGGCACCTGCTCCGAACAAATGTATGGGATGTGCGAGTCCCTCTGGGAGCCCAACATGGATCCA
GAACACCTGTTTGAAACCATCTCACAAGCCATGCTGAATGCCGTGGATCGGGATGCAGTGTCAGGCATGGGAGTCATTGT
CCACGTCATTGAGAAGGACAGGATTACCACCAGGACACTGAAGGCCCGCATGGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 16 .88 RPM |
| SRP017611_kidney | 28 .55 RPM |
| SRP017611_brain | 17 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004363 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000016587 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000015275 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007067 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000002233 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004131 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000012363 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012614 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000069744 | ortholog_one2many | 8 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012938 | possible_ortholog | 7 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013010 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_784 | 77.40 | 70.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1270 | 67.05 | 83.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1442 | 77.29 | 99.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000014497 retrocopies