Parental gene: | ENSFCAG00000022580 |
| Aliases: | None |
| Description: | None |
| Organism: | Cat (Felis catus) |
| Coordinates: | D1:10055007..10066188(+) |
>ENSFCAG00000022580
ATGGCGAATCTCTGGCGGCTGGGTGTCCTGTGTCGTGCGCAAGGAGGCCGAGCTCTGTTTCTCCGAATTCCAGTAGTCAG
ACCTGCTTATGTCTCAGCATTTCTCCAGGACCAACCTGCCCCAGGACAGTGTAGAACACAGCACATTCACCTGTCACCCA
ACCACCATGCTGGTTCCAAGGCTTCATCTCTCCACTGGACTGGTGAGAGGGTGGTCAGTGTTTTGCTCCTGGGCCTAATT
CCAGCTGCTTATTTGAATCCCAGCTCTGCGATGGACTACTCCTTGGCTGCAGCCCTCACGCTCCATAGTCACTGGGGCCT
TGGACAAGTGGTTACTGACTACGTTCATGGAGATGCTTTGCAGAAAACCGCCAAGGCAGGAGTTTTGGCCCTGTCAGCTT
TAACCTTTGCTGGGCTGTGTTATTTCAACTATCATGATGTGGGCATCTGCAAAGCTGTTGCCATGCTGTGGAAGCTCTGA
ATGGCGAATCTCTGGCGGCTGGGTGTCCTGTGTCGTGCGCAAGGAGGCCGAGCTCTGTTTCTCCGAATTCCAGTAGTCAG
ACCTGCTTATGTCTCAGCATTTCTCCAGGACCAACCTGCCCCAGGACAGTGTAGAACACAGCACATTCACCTGTCACCCA
ACCACCATGCTGGTTCCAAGGCTTCATCTCTCCACTGGACTGGTGAGAGGGTGGTCAGTGTTTTGCTCCTGGGCCTAATT
CCAGCTGCTTATTTGAATCCCAGCTCTGCGATGGACTACTCCTTGGCTGCAGCCCTCACGCTCCATAGTCACTGGGGCCT
TGGACAAGTGGTTACTGACTACGTTCATGGAGATGCTTTGCAGAAAACCGCCAAGGCAGGAGTTTTGGCCCTGTCAGCTT
TAACCTTTGCTGGGCTGTGTTATTTCAACTATCATGATGTGGGCATCTGCAAAGCTGTTGCCATGCTGTGGAAGCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 125 .15 RPM |
| SRP017611_kidney | 228 .07 RPM |
| SRP017611_brain | 67 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004066 | ortholog_one2one | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000013091 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008424 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000204370 | possible_ortholog | 8 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026496 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000002763 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012228 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015247 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000022980 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000015034 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010520 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_175 | 72.55 | 94.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_492 | 90.48 | 77.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1371 | 73.68 | 70.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000022580 retrocopies