Parental gene: | Sdhd, ENSRNOG00000022980 |
| Aliases: | None |
| Description: | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6PCT8] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 8:53625446..53634926(-) |
>ENSRNOG00000022980
ATGGCGGTTCTCTTAAAGCTGGGCGTTCTCTGCAGTGGCCAAGGAGCTCGAGCTCTGTCACTCCGAAGCCGGGCGGTCAG
ACCTGCTTTTGTGTCCGCATTTCTCCAGGACCAGCCTACCCCAGGATGGCGTGGCACCCAGCACATCCACCTGTCACCAA
GCCACCAGTCTGGTTCCAAGGCCGCATCTCTCCACTGGACCAGTGAGAGGGTTGTCAGTGTTTTGCTCTTGGGCCTGATT
CCAGCTGGGTACTTGAATCCCTGCTCTGTGGTGGACTACTCTCTGGCTGCAGCCCTCACCCTGCACAGTCACTGGGGCAT
TGGACAAGTGGTTACTGACTACGTTCATGGGGACGCACTGCAGAAGGCTACCAAGGCAGGCCTCTTGGCAGTCTCAGCTT
TGACCTTTGCTGGGCTTTGCTACTTCAATTACCACGATGTAGGCATCTGCAGAGCGGTTGCCATGCTGTGGAAGCTCTGA
ATGGCGGTTCTCTTAAAGCTGGGCGTTCTCTGCAGTGGCCAAGGAGCTCGAGCTCTGTCACTCCGAAGCCGGGCGGTCAG
ACCTGCTTTTGTGTCCGCATTTCTCCAGGACCAGCCTACCCCAGGATGGCGTGGCACCCAGCACATCCACCTGTCACCAA
GCCACCAGTCTGGTTCCAAGGCCGCATCTCTCCACTGGACCAGTGAGAGGGTTGTCAGTGTTTTGCTCTTGGGCCTGATT
CCAGCTGGGTACTTGAATCCCTGCTCTGTGGTGGACTACTCTCTGGCTGCAGCCCTCACCCTGCACAGTCACTGGGGCAT
TGGACAAGTGGTTACTGACTACGTTCATGGGGACGCACTGCAGAAGGCTACCAAGGCAGGCCTCTTGGCAGTCTCAGCTT
TGACCTTTGCTGGGCTTTGCTACTTCAATTACCACGATGTAGGCATCTGCAGAGCGGTTGCCATGCTGTGGAAGCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 80 .75 RPM |
| SRP017611_kidney | 229 .23 RPM |
| SRP017611_brain | 57 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004066 | ortholog_one2one | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000013091 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008424 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000022580 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000204370 | possible_ortholog | 8 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026496 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000002763 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012228 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015247 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000015034 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010520 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_744 | 61.11 | 77.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1529 | 77.99 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1686 | 90.00 | 75.47 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000022980 retrocopies