Parental gene: | TMEM98, ENSG00000006042 |
| Aliases: | None |
| Description: | transmembrane protein 98 [Source:HGNC Symbol;Acc:24529] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:31254927..31272124(+) |
>ENSG00000006042
ATGGAGACTGTGGTGATTGTTGCCATAGGTGTGCTGGCCACCATCTTTCTGGCTTCGTTTGCAGCCTTGGTGCTGGTTTG
CAGGCAGCGCTACTGCCGGCCGCGAGACCTGCTGCAGCGCTATGATTCTAAGCCCATTGTGGACCTCATTGGTGCCATGG
AGACCCAGTCTGAGCCCTCTGAGTTAGAACTGGACGATGTCGTTATCACCAACCCCCACATTGAGGCCATTCTGGAGAAT
GAAGACTGGATCGAAGATGCCTCGGGTCTCATGTCCCACTGCATTGCCATCTTGAAGATTTGTCACACTCTGACAGAGAA
GCTTGTTGCCATGACAATGGGCTCTGGGGCCAAGATGAAGACTTCAGCCAGTGTCAGCGACATCATTGTGGTGGCCAAGC
GGATCAGCCCCAGGGTGGATGATGTTGTGAAGTCGATGTACCCTCCGTTGGACCCCAAACTCCTGGACGCACGGACGACT
GCCCTGCTCCTGTCTGTCAGTCACCTGGTGCTGGTGACAAGGAATGCCTGCCATCTGACGGGAGGCCTGGACTGGATTGA
CCAGTCTCTGTCGGCTGCTGAGGAGCATTTGGAAGTCCTTCGAGAAGCAGCCCTAGCTTCTGAGCCAGATAAAGGCCTCC
CAGGCCCTGAAGGCTTCCTGCAGGAGCAGTCTGCAATTTAG
ATGGAGACTGTGGTGATTGTTGCCATAGGTGTGCTGGCCACCATCTTTCTGGCTTCGTTTGCAGCCTTGGTGCTGGTTTG
CAGGCAGCGCTACTGCCGGCCGCGAGACCTGCTGCAGCGCTATGATTCTAAGCCCATTGTGGACCTCATTGGTGCCATGG
AGACCCAGTCTGAGCCCTCTGAGTTAGAACTGGACGATGTCGTTATCACCAACCCCCACATTGAGGCCATTCTGGAGAAT
GAAGACTGGATCGAAGATGCCTCGGGTCTCATGTCCCACTGCATTGCCATCTTGAAGATTTGTCACACTCTGACAGAGAA
GCTTGTTGCCATGACAATGGGCTCTGGGGCCAAGATGAAGACTTCAGCCAGTGTCAGCGACATCATTGTGGTGGCCAAGC
GGATCAGCCCCAGGGTGGATGATGTTGTGAAGTCGATGTACCCTCCGTTGGACCCCAAACTCCTGGACGCACGGACGACT
GCCCTGCTCCTGTCTGTCAGTCACCTGGTGCTGGTGACAAGGAATGCCTGCCATCTGACGGGAGGCCTGGACTGGATTGA
CCAGTCTCTGTCGGCTGCTGAGGAGCATTTGGAAGTCCTTCGAGAAGCAGCCCTAGCTTCTGAGCCAGATAAAGGCCTCC
CAGGCCCTGAAGGCTTCCTGCAGGAGCAGTCTGCAATTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 5 .62 RPM |
| bodymap2_lung | 31 .91 RPM |
| bodymap2_breast | 15 .29 RPM |
| bodymap2_adipose | 10 .24 RPM |
| bodymap2_adrenal | 13 .51 RPM |
| bodymap2_skeletal_muscle | 1 .38 RPM |
| bodymap2_thyroid | 38 .64 RPM |
| bodymap2_prostate | 45 .59 RPM |
| bodymap2_colon | 36 .62 RPM |
| bodymap2_testis | 39 .74 RPM |
| bodymap2_brain | 29 .02 RPM |
| bodymap2_heart | 5 .72 RPM |
| bodymap2_white_blood_cells | 0 .12 RPM |
| bodymap2_lymph_node | 18 .62 RPM |
| bodymap2_ovary | 112 .75 RPM |
| bodymap2_kidney | 14 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014550 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013333 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001191 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022356 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006038 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000008166 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000008993 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1421 | 92.73 | 73.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3605 | 75.15 | 74.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000006042 retrocopies