RetrogeneDB ID: | retro_nleu_1840 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397312.1:9680004..9680682(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMEM98 | ||
Ensembl ID: | ENSNLEG00000006038 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.38 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | METVVIVAIGVLATIFLASFAALVLVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPSELELDDVVIT |
METVVIVA.GVLATIFLASFAALVLVCRQRY..P.D..QRYDSKPIVDLIGAM.T.SEPSELELDDVVIT | |
Retrocopy | METVVIVATGVLATIFLASFAALVLVCRQRYHQP*DRRQRYDSKPIVDLIGAMVTRSEPSELELDDVVIT |
Parental | NPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMKTSASVSDIIVVAKRISPRVD |
NPHIEAILEN.DWIEDASGLMSHCI.ILKICHTLTEKLVAMTMGSGAKM.TSA.VSDI.VVAK..SPRVD | |
Retrocopy | NPHIEAILENKDWIEDASGLMSHCIVILKICHTLTEKLVAMTMGSGAKMRTSAIVSDIVVVAK*NSPRVD |
Parental | DVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPD |
DVVK.MYPPLDPKLLD..TTALLLSV.HLVLVTRNACHL.GGL.W.DQSLSAAEEHLEVL.EAALA.EPD | |
Retrocopy | DVVKPMYPPLDPKLLDTGTTALLLSVCHLVLVTRNACHLMGGLEWVDQSLSAAEEHLEVLQEAALAFEPD |
Parental | KGLPGPEGFLQEQSAI |
KGLPGPEGFLQEQSAI | |
Retrocopy | KGLPGPEGFLQEQSAI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000014550 | 1 retrocopy | |
Homo sapiens | ENSG00000006042 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000013333 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000001191 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000022356 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000006038 | 3 retrocopies |
retro_nleu_1233, retro_nleu_1840 , retro_nleu_2635,
|
Pongo abelii | ENSPPYG00000008166 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000008993 | 3 retrocopies |