Parental gene:

SLC25A1, ENSG00000100075

Aliases:SLC25A1, CTP, D2L2AD, SEA, SLC20A3
Description:solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 [Source:HGNC Symbol;Acc:10979]
Organism:Human (Homo sapiens)
Coordinates:22:19163094..19166343(-)


>ENSG00000100075
ATGCCCGCGCCCCGCGCCCCGCGCGCTCTGGCGGCCGCCGCGCCCGCGTCCGGGAAGGCCAAGCTGACGCACCCGGGGAA
GGCGATCCTGGCAGGCGGCCTGGCGGGTGGCATCGAGATCTGCATCACCTTCCCCACCGAGTACGTGAAGACGCAGCTGC
AGCTGGACGAGCGCTCGCACCCGCCGCGGTACCGGGGCATCGGGGACTGCGTGCGGCAGACGGTTCGCAGCCATGGCGTC
CTGGGCCTGTACCGCGGCCTTAGCTCCCTGCTCTACGGTTCCATCCCCAAGGCGGCCGTCAGGTTTGGAATGTTCGAGTT
CCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGTGGGCTGCTGTGCGGCCTGGGCGCTGGCGTGG
CCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATCCACGACCAGACCTCCCCAAACCCCAAG
TACAGAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGCCTCACAGCCAC
TGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTCGTCATGACCTCCCTGCGCAACTGGTACCGAGGGGACAACC
CCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTGGAAACACTCCT
CTGGATGTGATTAAGACCCGGATGCAGGGCCTGGAGGCGCACAAATACCGGAACACGTGGGACTGCGGCTTGCAGATCCT
GAAGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGTGGCCATAGTGT
TTGTCATCTATGATGAAGTGGTGAAGCTGCTCAACAAAGTGTGGAAGACGGACTAA

Library Parental gene expression (RPM)
bodymap2_adipose 54 .49 RPM
bodymap2_adrenal 30 .62 RPM
bodymap2_brain 12 .59 RPM
bodymap2_breast 92 .04 RPM
bodymap2_colon 30 .92 RPM
bodymap2_heart 7 .86 RPM
bodymap2_kidney 38 .76 RPM
bodymap2_liver 53 .46 RPM
bodymap2_lung 30 .10 RPM
bodymap2_lymph_node 34 .52 RPM
bodymap2_ovary 39 .59 RPM
bodymap2_prostate 44 .63 RPM
bodymap2_skeletal_muscle 7 .37 RPM
bodymap2_testis 38 .18 RPM
bodymap2_thyroid 31 .71 RPM
bodymap2_white_blood_cells 20 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000006198 ortholog_one2one 2 retrogenes
retro_ggor_1230, retro_ggor_661,
Macaca mulatta ENSMMUG00000005431 ortholog_one2one 4 retrogenes
retro_mmul_1077, retro_mmul_1556, retro_mmul_1683, retro_mmul_485,
Nomascus leucogenys ENSNLEG00000005215 ortholog_one2one 2 retrogenes
retro_nleu_2866, retro_nleu_408,
Ochotona princeps ENSOPRG00000011649 ortholog_one2one 1 retrogene
retro_opri_1053,
Pongo abelii ENSPPYG00000029785 ortholog_one2one 9 retrogenes
retro_pabe_1346, retro_pabe_1414, retro_pabe_1529, retro_pabe_1671, retro_pabe_3125, retro_pabe_3217, retro_pabe_334, retro_pabe_3564, retro_pabe_719,
Pan troglodytes ENSPTRG00000014057 ortholog_one2one 3 retrogenes
retro_ptro_1139, retro_ptro_1364, retro_ptro_560,
Tursiops truncatus ENSTTRG00000006845 ortholog_one2one 1 retrogene
retro_ttru_228,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_804 84.74 98.07
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2. retro_hsap_1632 69.40 57.23
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Download FASTA sequences of all ENSG00000100075 retrocopies