Parental gene: | SLC25A1, ENSPPYG00000029785 |
| Aliases: | None |
| Description: | solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 [Source:HGNC Symbol;Acc:10979] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 22:15083848..15086428(-) |
>ENSPPYG00000029785
ATGTTCGAGTTCCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGTGGGCTGCTGTGCGGCCTGGG
CGCCGGCGTGGCCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATTCACGACCAGACCTCTC
CACACCCCAAGTACAAAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGC
CTCACAGCCACCGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTTGTCATGACCTCCCTGCGCAACTGGTACCG
AGGGGACAACCCCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTG
GAAACACTCCTCTGGATGTGATTAAGACCCGGATGCAGGGCCTGGAGGCGCACAAATACCGGAACACGTGGGACTGCGGC
TTGCAGATCCTGAGGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGT
GGCCATAGTGTTTATCATCTATGATGAAGTGGTGAAGCTGCTCAATAAAGTGTGGAAGACGGACTAA
ATGTTCGAGTTCCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGTGGGCTGCTGTGCGGCCTGGG
CGCCGGCGTGGCCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATTCACGACCAGACCTCTC
CACACCCCAAGTACAAAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGC
CTCACAGCCACCGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTTGTCATGACCTCCCTGCGCAACTGGTACCG
AGGGGACAACCCCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTG
GAAACACTCCTCTGGATGTGATTAAGACCCGGATGCAGGGCCTGGAGGCGCACAAATACCGGAACACGTGGGACTGCGGC
TTGCAGATCCTGAGGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGT
GGCCATAGTGTTTATCATCTATGATGAAGTGGTGAAGCTGCTCAATAAAGTGTGGAAGACGGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .70 RPM |
| SRP007412_cerebellum | 10 .58 RPM |
| SRP007412_heart | 5 .99 RPM |
| SRP007412_kidney | 187 .78 RPM |
| SRP007412_liver | 61 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000100075 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006198 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000005431 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005215 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000011649 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014057 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000006845 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_334 | 81.82 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_719 | 84.06 | 98.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1346 | 70.88 | 85.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1414 | 66.48 | 85.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_1529 | 67.57 | 51.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_1671 | 70.81 | 98.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_3125 | 52.80 | 58.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_3217 | 70.49 | 56.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_3564 | 69.37 | 51.92 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000029785 retrocopies