Parental gene: | SLC25A1, ENSPTRG00000014057 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 22:17581486..17584713(-) |
>ENSPTRG00000014057
ATGCCCGCGCCCCGCGCCCCGCGCGCTCTGGCGGCCGCCGCGCCCGCGTCCGGGAAGGCCAAGCTGACGCACCCGGGGAA
GGCGATCCTGGCAGGCGGCCTGGCGGGTGGCATCGAGATCTGCATCACTTTCCCCACCGAGTACGTGAAGACGCAGCTGC
AGCTGGACGAGCGCTCGCACCCGCCGCGGTACCGGGGCATCGGGGACTGCGTGCGGCAGACGGTTCGCAGCCATGGCGTC
CTGGGCCTGTACCGCGGCCTTAGCTCCCTGCTCTACGGCTCCATCCCCAAGGCGGCCGTCAGGTTTGGAATGTTCGAGTT
CCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGTGGGCTGCTGTGCGGCCTGGGCGCTGGCGTGG
CCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATCCACGACCAGACCTCCCCAAACCCCAAG
TACAGAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGCCTCACAGCCAC
TGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTCGTCATGACCTCCCTGCGCAACTGGTACCGAGGGGACAACC
CCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTGGAAACACTCCT
CTGGATGTGATTAAGACCCGGATGCAGGGCCTGGAGGCGCACAAATACCGGAACACGTGGGACTGCGGCTTGCAGATCCT
GAGGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGTGGCCATAGTGT
TTGTCATCTATGATGAAGTGGTGAAGCTGCTCAACAAAGTGTGGAAGACGGACTAA
ATGCCCGCGCCCCGCGCCCCGCGCGCTCTGGCGGCCGCCGCGCCCGCGTCCGGGAAGGCCAAGCTGACGCACCCGGGGAA
GGCGATCCTGGCAGGCGGCCTGGCGGGTGGCATCGAGATCTGCATCACTTTCCCCACCGAGTACGTGAAGACGCAGCTGC
AGCTGGACGAGCGCTCGCACCCGCCGCGGTACCGGGGCATCGGGGACTGCGTGCGGCAGACGGTTCGCAGCCATGGCGTC
CTGGGCCTGTACCGCGGCCTTAGCTCCCTGCTCTACGGCTCCATCCCCAAGGCGGCCGTCAGGTTTGGAATGTTCGAGTT
CCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGTGGGCTGCTGTGCGGCCTGGGCGCTGGCGTGG
CCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATCCACGACCAGACCTCCCCAAACCCCAAG
TACAGAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGCCTCACAGCCAC
TGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTCGTCATGACCTCCCTGCGCAACTGGTACCGAGGGGACAACC
CCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTGGAAACACTCCT
CTGGATGTGATTAAGACCCGGATGCAGGGCCTGGAGGCGCACAAATACCGGAACACGTGGGACTGCGGCTTGCAGATCCT
GAGGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGTGGCCATAGTGT
TTGTCATCTATGATGAAGTGGTGAAGCTGCTCAACAAAGTGTGGAAGACGGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .17 RPM |
| SRP007412_cerebellum | 15 .24 RPM |
| SRP007412_heart | 6 .88 RPM |
| SRP007412_kidney | 221 .01 RPM |
| SRP007412_liver | 129 .95 RPM |
| SRP007412_testis | 15 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000100075 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006198 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000005431 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005215 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000011649 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029785 | ortholog_one2one | 9 retrogenes | |
| Tursiops truncatus | ENSTTRG00000006845 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_560 | 85.16 | 98.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1139 | 69.54 | 54.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1364 | 70.33 | 65.92 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000014057 retrocopies