Parental gene:

SLC25A1, ENSPTRG00000014057

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:22:17581486..17584713(-)


>ENSPTRG00000014057
ATGCCCGCGCCCCGCGCCCCGCGCGCTCTGGCGGCCGCCGCGCCCGCGTCCGGGAAGGCCAAGCTGACGCACCCGGGGAA
GGCGATCCTGGCAGGCGGCCTGGCGGGTGGCATCGAGATCTGCATCACTTTCCCCACCGAGTACGTGAAGACGCAGCTGC
AGCTGGACGAGCGCTCGCACCCGCCGCGGTACCGGGGCATCGGGGACTGCGTGCGGCAGACGGTTCGCAGCCATGGCGTC
CTGGGCCTGTACCGCGGCCTTAGCTCCCTGCTCTACGGCTCCATCCCCAAGGCGGCCGTCAGGTTTGGAATGTTCGAGTT
CCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGTGGGCTGCTGTGCGGCCTGGGCGCTGGCGTGG
CCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATCCACGACCAGACCTCCCCAAACCCCAAG
TACAGAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGCCTCACAGCCAC
TGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTCGTCATGACCTCCCTGCGCAACTGGTACCGAGGGGACAACC
CCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTGGAAACACTCCT
CTGGATGTGATTAAGACCCGGATGCAGGGCCTGGAGGCGCACAAATACCGGAACACGTGGGACTGCGGCTTGCAGATCCT
GAGGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGTGGCCATAGTGT
TTGTCATCTATGATGAAGTGGTGAAGCTGCTCAACAAAGTGTGGAAGACGGACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 25 .17 RPM
SRP007412_cerebellum 15 .24 RPM
SRP007412_heart 6 .88 RPM
SRP007412_kidney 221 .01 RPM
SRP007412_liver 129 .95 RPM
SRP007412_testis 15 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000100075 ortholog_one2one 2 retrogenes
retro_hsap_1632, retro_hsap_804,
Gorilla gorilla ENSGGOG00000006198 ortholog_one2one 2 retrogenes
retro_ggor_1230, retro_ggor_661,
Macaca mulatta ENSMMUG00000005431 ortholog_one2one 4 retrogenes
retro_mmul_1077, retro_mmul_1556, retro_mmul_1683, retro_mmul_485,
Nomascus leucogenys ENSNLEG00000005215 ortholog_one2one 2 retrogenes
retro_nleu_2866, retro_nleu_408,
Ochotona princeps ENSOPRG00000011649 ortholog_one2one 1 retrogene
retro_opri_1053,
Pongo abelii ENSPPYG00000029785 ortholog_one2one 9 retrogenes
retro_pabe_1346, retro_pabe_1414, retro_pabe_1529, retro_pabe_1671, retro_pabe_3125, retro_pabe_3217, retro_pabe_334, retro_pabe_3564, retro_pabe_719,
Tursiops truncatus ENSTTRG00000006845 ortholog_one2one 1 retrogene
retro_ttru_228,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_560 85.16 98.71
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2. retro_ptro_1139 69.54 54.34
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3. retro_ptro_1364 70.33 65.92
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Download FASTA sequences of all ENSPTRG00000014057 retrocopies