Parental gene: | SLC25A1, ENSMMUG00000005431 |
| Aliases: | None |
| Description: | tricarboxylate transport protein, mitochondrial [Source:RefSeq peptide;Acc:NP_001253635] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 10:63218569..63221809(-) |
>ENSMMUG00000005431
ATGGCCGCGCCCCGCGCCCCGCGCGCTCTGGCGGCCGCCGCGCCTGCGTCCGGGAAGGCCAAGCTGACGCACCCGGGGAA
GGCGATCCTGGCAGGCGGCCTGGCGGGTGGCATCGAGATCTGCATCACCTTCCCCACTGAGTACGTGAAGACGCAGCTGC
AGCTGGACGAGCGCTCGCACCCGCCGCGGTACCGGGGCATCGGGGACTGCGTGCGGCAGACGGTCCGCAGCCATGGCGTC
CTGGGTCTGTACCGCGGCCTCAGCTCCCTGCTCTACGGCTCCATCCCCAAGGCAGCCGTCAGGTTCGGAATGTTCGAGTT
CCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGCGGGCTGCTGTGTGGCCTAGGCGCCGGCGTGG
CCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATCCACGACCAGACTTCTCCAAACCCCAAA
TACAGAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGCCTCACAGCCAC
CGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTCGTCATGACCTCCCTGCGCAACTGGTACCGAGGGGACAACC
CCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTGGAAACACTCCT
CTGGATGTTATTAAGACCCGGATGCAGGGCCTGGAGGCACACAAATACCGGAACACGTGGGACTGCGGCTTGCAGATCCT
GAGGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCGCGCCTGGGCCGGGTCTGCCTGGATGTGGCCATAGTGT
TTATCATCTATGATGAAGTGGTGAAGCTGCTCAACAAAGTGTGGAAGACAGACTAA
ATGGCCGCGCCCCGCGCCCCGCGCGCTCTGGCGGCCGCCGCGCCTGCGTCCGGGAAGGCCAAGCTGACGCACCCGGGGAA
GGCGATCCTGGCAGGCGGCCTGGCGGGTGGCATCGAGATCTGCATCACCTTCCCCACTGAGTACGTGAAGACGCAGCTGC
AGCTGGACGAGCGCTCGCACCCGCCGCGGTACCGGGGCATCGGGGACTGCGTGCGGCAGACGGTCCGCAGCCATGGCGTC
CTGGGTCTGTACCGCGGCCTCAGCTCCCTGCTCTACGGCTCCATCCCCAAGGCAGCCGTCAGGTTCGGAATGTTCGAGTT
CCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGACAGCACGCGCGGGCTGCTGTGTGGCCTAGGCGCCGGCGTGG
CCGAGGCCGTGGTGGTCGTGTGCCCCATGGAGACCATCAAGGTGAAGTTCATCCACGACCAGACTTCTCCAAACCCCAAA
TACAGAGGATTCTTCCACGGGGTTAGGGAGATTGTGCGGGAACAAGGGCTGAAGGGGACGTACCAGGGCCTCACAGCCAC
CGTCCTGAAGCAGGGCTCGAACCAGGCCATCCGCTTCTTCGTCATGACCTCCCTGCGCAACTGGTACCGAGGGGACAACC
CCAACAAGCCCATGAACCCTCTGATCACTGGGGTCTTCGGAGCTATTGCAGGCGCAGCCAGTGTCTTTGGAAACACTCCT
CTGGATGTTATTAAGACCCGGATGCAGGGCCTGGAGGCACACAAATACCGGAACACGTGGGACTGCGGCTTGCAGATCCT
GAGGAAGGAGGGGCTCAAGGCATTCTACAAGGGCACTGTCCCGCGCCTGGGCCGGGTCTGCCTGGATGTGGCCATAGTGT
TTATCATCTATGATGAAGTGGTGAAGCTGCTCAACAAAGTGTGGAAGACAGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 28 .72 RPM |
| SRP007412_brain | 9 .64 RPM |
| SRP007412_cerebellum | 11 .75 RPM |
| SRP007412_heart | 15 .43 RPM |
| SRP007412_kidney | 170 .89 RPM |
| SRP007412_liver | 328 .07 RPM |
| SRP007412_testis | 32 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000100075 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006198 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005215 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000011649 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029785 | ortholog_one2one | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000014057 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000006845 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_485 | 80.13 | 97.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1077 | 77.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_1556 | 68.10 | 65.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_1683 | 61.94 | 77.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000005431 retrocopies