Parental gene:

NPM3, ENSG00000107833

Aliases:NPM3, PORMIN, TMEM123
Description:nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:7931]
Organism:Human (Homo sapiens)
Coordinates:10:103541081..103543170(-)


>ENSG00000107833
ATGGCCGCCGGTACTGCAGCTGCCTTAGCGTTTTTGAGTCAGGAGAGCCGAACGCGGGCCGGGGGTGTCGGGGGCCTACG
GGTCCCGGCCCCGGTCACTATGGACAGTTTTTTCTTCGGCTGTGAGCTCTCCGGCCACACCCGCTCCTTCACCTTTAAGG
TAGAGGAAGAGGATGATGCGGAGCACGTGCTGGCACTAACCATGCTCTGCCTCACCGAGGGAGCCAAAGACGAGTGTAAT
GTGGTAGAAGTTGTGGCCCGGAACCATGACCATCAGGAGATCGCAGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAACC
CATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGGCCCTGTGCGGATCA
CTGGGCGGCACCAGATTGTTACGATGAGCAATGATGTTTCTGAGGAGGAGAGCGAGGAAGAGGAAGAGGACAGTGATGAG
GAAGAAGTTGAGCTGTGCCCCATCCTTCCTGCCAAAAAGCAGGGGGGCAGGCCCTAG

Library Parental gene expression (RPM)
bodymap2_liver 2 .26 RPM
bodymap2_lung 6 .35 RPM
bodymap2_breast 4 .18 RPM
bodymap2_adipose 4 .99 RPM
bodymap2_adrenal 8 .00 RPM
bodymap2_skeletal_muscle 2 .53 RPM
bodymap2_thyroid 5 .82 RPM
bodymap2_prostate 7 .24 RPM
bodymap2_colon 4 .93 RPM
bodymap2_testis 10 .97 RPM
bodymap2_brain 2 .58 RPM
bodymap2_heart 1 .57 RPM
bodymap2_white_blood_cells 3 .58 RPM
bodymap2_lymph_node 7 .38 RPM
bodymap2_ovary 9 .70 RPM
bodymap2_kidney 6 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017639 ortholog_one2many 2 retrogenes
retro_amel_1233, retro_amel_90,
Bos taurus ENSBTAG00000016335 ortholog_one2one 1 retrogene
retro_btau_1164,
Canis familiaris ENSCAFG00000009919 ortholog_one2one 2 retrogenes
retro_cfam_1968, retro_cfam_2064,
Callithrix jacchus ENSCJAG00000017650 ortholog_one2one 2 retrogenes
retro_cjac_2491, retro_cjac_3052,
Cavia porcellus ENSCPOG00000006301 ortholog_one2one 1 retrogene
retro_cpor_1315,
Dasypus novemcinctus ENSDNOG00000018876 ortholog_one2one 1 retrogene
retro_dnov_1279,
Dipodomys ordii ENSDORG00000003491 ortholog_one2one 1 retrogene
retro_dord_577,
Felis catus ENSFCAG00000007178 ortholog_one2many 1 retrogene
retro_fcat_1906,
Homo sapiens ENSG00000181163 within_species_paralog 30 retrogenes
retro_hsap_1275, retro_hsap_129, retro_hsap_1526, retro_hsap_1580, retro_hsap_1593, retro_hsap_1621, retro_hsap_2226, retro_hsap_2375, retro_hsap_2478, retro_hsap_2856, retro_hsap_2862, retro_hsap_3355, retro_hsap_3460, retro_hsap_3609, retro_hsap_3636, retro_hsap_3718, retro_hsap_3776, retro_hsap_3808, retro_hsap_3817, retro_hsap_3822, retro_hsap_3962, retro_hsap_4666, retro_hsap_4753, retro_hsap_4785, retro_hsap_614, retro_hsap_638, retro_hsap_690, retro_hsap_717, retro_hsap_785, retro_hsap_961,
Macropus eugenii ENSMEUG00000003465 ortholog_one2many 2 retrogenes
retro_meug_20, retro_meug_25,
Microcebus murinus ENSMICG00000011739 ortholog_one2one 1 retrogene
retro_mmur_126,
Myotis lucifugus ENSMLUG00000004961 ortholog_one2one 1 retrogene
retro_mluc_2333,
Macaca mulatta ENSMMUG00000015774 ortholog_one2one 1 retrogene
retro_mmul_1072,
Mustela putorius furo ENSMPUG00000016894 ortholog_one2one 2 retrogenes
retro_mputfur_750, retro_mputfur_759,
Mus musculus ENSMUSG00000056209 ortholog_one2one 2 retrogenes
retro_mmus_2756, retro_mmus_3479,
Ochotona princeps ENSOPRG00000009229 ortholog_one2one 2 retrogenes
retro_opri_1019, retro_opri_92,
Pongo abelii ENSPPYG00000002589 ortholog_one2one 1 retrogene
retro_pabe_706,
Pan troglodytes ENSPTRG00000002875 ortholog_one2one 1 retrogene
retro_ptro_551,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_792 67.92 58.43
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Download FASTA sequences of all ENSG00000107833 retrocopies