Parental gene:

RPLP1, ENSG00000137818

Aliases:RPLP1, LP1, P1, RPP1
Description:ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]
Organism:Human (Homo sapiens)
Coordinates:15:69745122..69748255(+)


>ENSG00000137818
ATGGCCTCTGTCTCCGAGCTCGCCTGCATCTACTCGGCCCTCATTCTGCACGACGATGAGGTGACAGTCACGGAGGATAA
GATCAATGCCCTCATTAAAGCAGCCGGTGTAAATGTTGAGCCTTTTTGGCCTGGCTTGTTTGCAAAGGCCCTGGCCAACG
TCAACATTGGGAGCCTCATCTGCAATGTAGGGGCCGGTGGACCTGCTCCAGCAGCTGGTGCTGCACCAGCAGGAGGTCCT
GCCCCCTCCACTGCTGCTGCTCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGA
CATGGGCTTTGGTCTTTTTGACTAA

Library Parental gene expression (RPM)
bodymap2_liver 291 .89 RPM
bodymap2_lung 786 .06 RPM
bodymap2_breast 301 .89 RPM
bodymap2_adipose 427 .30 RPM
bodymap2_adrenal 725 .01 RPM
bodymap2_skeletal_muscle 1616 .35 RPM
bodymap2_thyroid 263 .03 RPM
bodymap2_prostate 839 .59 RPM
bodymap2_colon 579 .73 RPM
bodymap2_testis 367 .99 RPM
bodymap2_brain 87 .55 RPM
bodymap2_heart 216 .12 RPM
bodymap2_white_blood_cells 956 .87 RPM
bodymap2_lymph_node 987 .56 RPM
bodymap2_ovary 567 .51 RPM
bodymap2_kidney 277 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018320 ortholog_one2one 4 retrogenes
Callithrix jacchus ENSCJAG00000032919 ortholog_one2one 19 retrogenes
Equus caballus ENSECAG00000008542 possible_ortholog 4 retrogenes
Gorilla gorilla ENSGGOG00000003980 ortholog_one2one 13 retrogenes
Latimeria chalumnae ENSLACG00000012630 ortholog_one2many 1 retrogene
Macropus eugenii ENSMEUG00000015277 possible_ortholog 6 retrogenes
Myotis lucifugus ENSMLUG00000010542 possible_ortholog 33 retrogenes
Monodelphis domestica ENSMODG00000009209 possible_ortholog 1 retrogene
Mustela putorius furo ENSMPUG00000000204 ortholog_one2one 13 retrogenes
Mus musculus ENSMUSG00000007892 possible_ortholog 6 retrogenes
Oryctolagus cuniculus ENSOCUG00000015087 possible_ortholog 8 retrogenes
Otolemur garnettii ENSOGAG00000029641 ortholog_one2one 19 retrogenes
Procavia capensis ENSPCAG00000014595 ortholog_one2one 7 retrogenes
Pongo abelii ENSPPYG00000006601 ortholog_one2one 5 retrogenes
Rattus norvegicus ENSRNOG00000011955 possible_ortholog 6 retrogenes
Rattus norvegicus ENSRNOG00000013874 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000027893 ortholog_one2one 8 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_472 58.93 98.25
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2. retro_hsap_533 85.33 64.91
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3. retro_hsap_679 71.82 95.61
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4. retro_hsap_1325 75.00 100.00
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5. retro_hsap_1366 89.55 58.77
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6. retro_hsap_1719 82.46 99.12
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7. retro_hsap_1835 81.82 57.89
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8. retro_hsap_2014 88.89 62.28
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9. retro_hsap_2079 83.12 67.54
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10. retro_hsap_2348 83.33 100.00
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11. retro_hsap_2897 72.06 58.77
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12. retro_hsap_2936 50.50 88.60
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13. retro_hsap_3169 77.17 79.82
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14. retro_hsap_3382 64.04 78.07
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15. retro_hsap_3392 72.81 99.12
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16. retro_hsap_3523 77.78 63.16
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17. retro_hsap_3768 71.72 84.21
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18. retro_hsap_3939 64.71 86.84
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Download FASTA sequences of all ENSG00000137818 retrocopies