RetrogeneDB ID: | retro_ogar_2413 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873620.1:299041..299376(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSOGAG00000029641 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 69.49 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MASVSELA-CIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPA |
MAS.S.L..CIYSA.IL..D.V.V.ED.INA..KAAGVNVEPFWPGLF.KALAN.N.G.LICN....GPA | |
Retrocopy | MASISKLS<CIYSAFILQNDDVIVIEDEINAFMKAAGVNVEPFWPGLFVKALANINNGNLICNIRSYGPA |
Parental | PAAGAAPAGGPAPS-TAAAPAE-EKKVEAKKEESEESDDD-MGFGLFD |
P.AGAAPAGG.APS.TA.AP.E.E.KVEAKK....ESD....GFGLFD | |
Retrocopy | PSAGAAPAGGLAPS<TATAPVE<ENKVEAKK-AAQESDNG<QGFGLFD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |