Parental gene: | DPPA3, ENSG00000187569 |
| Aliases: | DPPA3, STELLA |
| Description: | developmental pluripotency associated 3 [Source:HGNC Symbol;Acc:19199] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:7864049..7870155(+) |
>ENSG00000187569
ATGGACCCATCACAGTTTAATCCAACCTACATCCCAGGGTCTCCACAAATGCTCACCGAAGAAAATTCCCGGGACGATTC
AGGGGCCTCTCAAATCTCCTCCGAGACGTTGATAAAGAACCTTAGTAACTTGACTATCAACGCTAGTAGCGAATCTGTTT
CCCCTCTATCGGAAGCTTTACTCCGTCGAGAGTCTGTAGGAGCAGCAGTCCTCAGGGAAATCGAAGATGAGTGGCTTTAC
AGCAGGAGAGGAGTAAGAACATTGCTGTCTGTGCAGAGAGAAAAGATGGCAAGATTGAGATACATGTTACTCGGCGGAGT
TCGTACGCATGAAAGAAGACCAACAAACAAGGAGCCTAAGGGAGTTAAGAAGGAATCAAGACCATTCAAATGTCCCTGCA
GTTTCTGCGTGTCTAATGGATGGGATCCTTCTGAGAATGCTAGAATAGGGAATCAAGACACCAAGCCACTTCAGCCATAA
ATGGACCCATCACAGTTTAATCCAACCTACATCCCAGGGTCTCCACAAATGCTCACCGAAGAAAATTCCCGGGACGATTC
AGGGGCCTCTCAAATCTCCTCCGAGACGTTGATAAAGAACCTTAGTAACTTGACTATCAACGCTAGTAGCGAATCTGTTT
CCCCTCTATCGGAAGCTTTACTCCGTCGAGAGTCTGTAGGAGCAGCAGTCCTCAGGGAAATCGAAGATGAGTGGCTTTAC
AGCAGGAGAGGAGTAAGAACATTGCTGTCTGTGCAGAGAGAAAAGATGGCAAGATTGAGATACATGTTACTCGGCGGAGT
TCGTACGCATGAAAGAAGACCAACAAACAAGGAGCCTAAGGGAGTTAAGAAGGAATCAAGACCATTCAAATGTCCCTGCA
GTTTCTGCGTGTCTAATGGATGGGATCCTTCTGAGAATGCTAGAATAGGGAATCAAGACACCAAGCCACTTCAGCCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 0 .00 RPM |
| bodymap2_lung | 0 .00 RPM |
| bodymap2_breast | 0 .00 RPM |
| bodymap2_adipose | 0 .00 RPM |
| bodymap2_adrenal | 0 .00 RPM |
| bodymap2_skeletal_muscle | 0 .00 RPM |
| bodymap2_thyroid | 0 .00 RPM |
| bodymap2_prostate | 0 .00 RPM |
| bodymap2_colon | 0 .00 RPM |
| bodymap2_testis | 0 .47 RPM |
| bodymap2_brain | 0 .00 RPM |
| bodymap2_heart | 0 .02 RPM |
| bodymap2_white_blood_cells | 0 .00 RPM |
| bodymap2_lymph_node | 0 .00 RPM |
| bodymap2_ovary | 0 .00 RPM |
| bodymap2_kidney | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046609 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032092 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005409 | ortholog_one2one | 10 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013040 | ortholog_one2one | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000017530 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000046323 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026887 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000024813 | ortholog_one2one | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000004230 | ortholog_one2one | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000004617 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000022950 | ortholog_one2many | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000751 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1043 | 75.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1323 | 98.11 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1618 | 59.33 | 91.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2648 | 57.50 | 98.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_4010 | 58.51 | 57.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_4887 | 93.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000187569 retrocopies