Parental gene:

TMX1, ENSGGOG00000009768

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:14:32096487..32113245(+)


>ENSGGOG00000009768
ATGGCGCCCTCCGGGAGTCTTGCAGTTCCCCTGGCAGTCCTGGTGCTGTTGCTTTGGGGTGCTCCCTGGACGCACGGGCG
GCGGAGCAACGTTCGCGTCATCACGGACGAGAACTGGAGAGAACTGCTGGAAGGAGACTGGATGATAGAATTTTATGCCC
CGTGGTGCCCTGCTTGTCAAAATCTTCAACCGGAATGGGAAAGTTTTGCTGAATGGGGAGAAGATCTTGAGGTTAATGTT
GCGAAAGTAGATGTCACAGAGCAGCCAGGACTGAGTGGACGGTTTATCATAACTGCTCTTCCTACTATTTATCATTGTAA
AGATGGTGAATTTAGGCGCTATCAGGGTCCAAGGACTAAGAAGGACTTCATAAACTTTATAAGTGATAAAGAGTGGAAGA
GTATTGAGCCCGTTTCATCATGGTTTGGTCCAGGTTCTGTTCTGATGAGTAGTATGTCAGCACTCTTTCAGCTATCTATG
TGGATCAGGACTTGCCATAACTACTTTATTGAAGACCTTGGATTGCCAGTGTGGGGATCATATACTGTTTTTGCTTTAGC
AACTCTGTTTTCCGGACTGTTATTAGGACTCTGTATGATATTTGTGGCAGATTGCCTTTGTCCTTCAAAAAGGCGCAGAC
CACAGCCATACCCATACCTTTCAAAAAAATTATTATCAGAATCTGCACAACCTTTGAAAAAAGTGGAGGAGGAACAAGAG
GCGGATGAAGAAGATGTTTCAGAAGAGGAAGCTGAAAGTAAAGAAGGAACAAACAAAGACTTTCCACAGAATGCCATAAG
ACAACGCTCTCTGGGTCCATCATTGGCCACAGATAAATCCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .79 RPM
SRP007412_cerebellum 9 .46 RPM
SRP007412_heart 3 .13 RPM
SRP007412_kidney 20 .61 RPM
SRP007412_liver 15 .51 RPM
SRP007412_testis 24 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015041 ortholog_one2one 1 retrogene
retro_amel_719,
Canis familiaris ENSCAFG00000014626 ortholog_one2one 1 retrogene
retro_cfam_796,
Choloepus hoffmanni ENSCHOG00000011305 ortholog_one2one 1 retrogene
retro_chof_1249,
Callithrix jacchus ENSCJAG00000006893 ortholog_one2one 1 retrogene
retro_cjac_1453,
Dasypus novemcinctus ENSDNOG00000016496 ortholog_one2one 1 retrogene
retro_dnov_78,
Felis catus ENSFCAG00000002780 ortholog_one2one 1 retrogene
retro_fcat_333,
Homo sapiens ENSG00000139921 ortholog_one2one 2 retrogenes
retro_hsap_3840, retro_hsap_3970,
Loxodonta africana ENSLAFG00000013251 ortholog_one2one 1 retrogene
retro_lafr_1214,
Macaca mulatta ENSMMUG00000001901 ortholog_one2one 1 retrogene
retro_mmul_1618,
Nomascus leucogenys ENSNLEG00000012362 ortholog_one2one 2 retrogenes
retro_nleu_1976, retro_nleu_2524,
Oryctolagus cuniculus ENSOCUG00000003980 ortholog_one2one 1 retrogene
retro_ocun_571,
Pongo abelii ENSPPYG00000005810 ortholog_one2one 2 retrogenes
retro_pabe_3058, retro_pabe_3264,
Pan troglodytes ENSPTRG00000006339 ortholog_one2one 2 retrogenes
retro_ptro_2522, retro_ptro_2695,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2587 84.70 99.64
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Download FASTA sequences of all ENSGGOG00000009768 retrocopies