Parental gene:

MMU.2213, ENSMMUG00000001901

Aliases:TMX1, TXNDC, TXNDC1
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:114288132..114304661(+)


>ENSMMUG00000001901
ATGGCGCCCTCCGGGAGTCCTGCAGTTACCCTGGCAGTCCTGGTGCTGTTGCTTTGGGGTGCTCCCTGGACGCACGGGCG
GCGGAGCAACGTTCGCGTCATCACGGACGAGAACTGGAGAGAGCTGCTGGAAGGAGACTGGATGATAGAATTTTACGCCC
CGTGGTGCCCTGCTTGTCAGAATCTTCAACCGGAATGGGAAAGTTTTGCTGAATGGGGAGAAGATCTTGAGGTTAATGTT
GCAAAAGTAGATGTCACAGAGCAGCCAGGACTGAGTGGACGGTTTATCATAACTGCTCTTCCTACTATTTATCATTGTAA
AGATGGTGAATTTAGGCGCTATCAGGGTCCAAGGACTAAGAAGGACTTCATAAACTTTATAAGTGATAAAGAGTGGAAGA
GTATTGAGCCCGTTTCATCATGGTTTGGTCCAGGTTCTGTTCTGATGAGTAGTATGTCAGCACTCTTTCAGCTATCTATG
TGGATCAGGGCTTGCCATAACTACTTTATTGAAGACCTTGGATTGCCAGTGTGGGGATCATATACTGTTTTTGCTTTAGC
AACTCTGTTTTCCGGACTGTTATTAGGACTCTGTATGATATTTGTGGCAGATTGCCTTTGTCCTTCAAAAAGGCGCAGGC
CACAGCCATACCCATACCCTTCAAAAAAATTATTATCAGAATCCGCACAACCTTTGAAAAAAGTGGAGGAGGAACAAGAG
GCGGATGAAGAAGATGTTTCAGAAGAAGAAACTGAACGTAAAGAAGGAACAAACAAAGACTTTCCACAGAATGCCATAAG
ACAACGCTCTCTGGGTCCATCATTGGCCACAGATAAATCCTAG

Library Parental gene expression (RPM)
SRP007412_brain 11 .77 RPM
SRP007412_brain_prefrontal_cortex 11 .03 RPM
SRP007412_cerebellum 16 .21 RPM
SRP007412_heart 9 .95 RPM
SRP007412_kidney 20 .07 RPM
SRP007412_liver 9 .18 RPM
SRP007412_testis 8 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015041 ortholog_one2one 1 retrogene
retro_amel_719,
Canis familiaris ENSCAFG00000014626 ortholog_one2one 1 retrogene
retro_cfam_796,
Choloepus hoffmanni ENSCHOG00000011305 ortholog_one2one 1 retrogene
retro_chof_1249,
Callithrix jacchus ENSCJAG00000006893 ortholog_one2one 1 retrogene
retro_cjac_1453,
Dasypus novemcinctus ENSDNOG00000016496 ortholog_one2one 1 retrogene
retro_dnov_78,
Felis catus ENSFCAG00000002780 ortholog_one2one 1 retrogene
retro_fcat_333,
Homo sapiens ENSG00000139921 ortholog_one2one 2 retrogenes
retro_hsap_3840, retro_hsap_3970,
Gorilla gorilla ENSGGOG00000009768 ortholog_one2one 1 retrogene
retro_ggor_2587,
Loxodonta africana ENSLAFG00000013251 ortholog_one2one 1 retrogene
retro_lafr_1214,
Nomascus leucogenys ENSNLEG00000012362 ortholog_one2one 2 retrogenes
retro_nleu_1976, retro_nleu_2524,
Oryctolagus cuniculus ENSOCUG00000003980 ortholog_one2one 1 retrogene
retro_ocun_571,
Pongo abelii ENSPPYG00000005810 ortholog_one2one 2 retrogenes
retro_pabe_3058, retro_pabe_3264,
Pan troglodytes ENSPTRG00000006339 ortholog_one2one 2 retrogenes
retro_ptro_2522, retro_ptro_2695,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1618 77.74 100.00
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Download FASTA sequences of all ENSMMUG00000001901 retrocopies