Parental gene:

RPL5, ENSLAFG00000011916

Aliases:None
Description:ribosomal protein L5 [Source:HGNC Symbol;Acc:10360]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_60:9070934..9076987(-)


>ENSLAFG00000011916
AAGGGGTTTGTTAAAGTTGTGAAGAACAAGGCCTACTTCAAGAGATACCAAGTGAAATTTAGAAGAAGACGAGAGGGTAA
AACTGATTACTATGCTCGGAAACGCTTGGTAATTCAGGATAAAAATAAATACAACACACCCAAATACAGGATGATAGTTC
GTGTAACCAACAGAGATATCATTTGCCAGATTGCCTATGCCCGTATAGAAGGGGACATGATAGTCTGCGCAGCTTATGCT
CACGAACTCCCAAAGTACGGTGTGAAAGTCGGCCTGACAAATTATGCTGCTGCATATTGTACTGGCCTGCTGCTGGCTCG
CAGGCTTCTCAATAGGTTTGGGATGGACAAGATCTATGAAGGCCAAGTGGAGGTAACCGGAGATGAATACAATGTGGAAA
GCATTGATGGTCAACCTGGTGCCTTCACGTGCTATTTGGATGCAGGTCTTGCCAGAACTACCACTGGGAATAAAGTTTTT
GGGGCTCTGAAGGGAGCAGTGGATGGAGGCTTGTCCATCCCTCACAGTACCAAACGATTCCCTGGTTACGATTCAGAAAG
CAAGGAATTCAATGCAGAAGTACATCGGAAACACATCATGGGTCAGAACGTTGCAGATTATATGCGTTACCTAATGGAAG
AAGATGAAGATGCTTATAAGAAACAATTCTCTCAATACATAAAGAACAACGTAACTCCAGACATGATGGAGGAGATGTAC
AAGAAAGCACATGCTGCTATAAGAGAGAATCCAGTTTATGAGAAGAAGCCTAAGAAAGATGTTAAAAAGAAGAGGTGGAA
TCGTCCCAAAATGTCTCTTGCCCAGAAGAAAGATCGGGTAGCTCAGAAGAAGGCAAGCTTCCTCAGAGCTCAGGAGCGGG
CTGCTGAGAGCTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000020150 ortholog_one2one 4 retrogenes
retro_cfam_1505, retro_cfam_1696, retro_cfam_905, retro_cfam_906,
Felis catus ENSFCAG00000024680 ortholog_one2one 5 retrogenes
retro_fcat_281, retro_fcat_304, retro_fcat_453, retro_fcat_458, retro_fcat_463,
Macropus eugenii ENSMEUG00000006361 ortholog_one2many 3 retrogenes
retro_meug_1168, retro_meug_1537, retro_meug_2146,
Myotis lucifugus ENSMLUG00000008956 ortholog_one2one 1 retrogene
retro_mluc_925,
Monodelphis domestica ENSMODG00000011635 ortholog_one2many 1 retrogene
retro_mdom_748,
Nomascus leucogenys ENSNLEG00000010500 possible_ortholog 2 retrogenes
retro_nleu_2102, retro_nleu_39,
Ornithorhynchus anatinus ENSOANG00000004669 ortholog_many2many 1 retrogene
retro_oana_97,
Procavia capensis ENSPCAG00000011865 ortholog_one2one 2 retrogenes
retro_pcap_159, retro_pcap_201,
Petromyzon marinus ENSPMAG00000002040 ortholog_one2many 1 retrogene
retro_pmar_23,
Pongo abelii ENSPPYG00000001152 possible_ortholog 32 retrogenes
retro_pabe_1053, retro_pabe_1219, retro_pabe_1274, retro_pabe_1307, retro_pabe_1331, retro_pabe_1501, retro_pabe_1918, retro_pabe_1931, retro_pabe_2019, retro_pabe_2123, retro_pabe_2238, retro_pabe_2457, retro_pabe_246, retro_pabe_247, retro_pabe_2640, retro_pabe_2641, retro_pabe_2658, retro_pabe_2813, retro_pabe_2841, retro_pabe_2909, retro_pabe_3247, retro_pabe_3320, retro_pabe_3360, retro_pabe_3534, retro_pabe_446, retro_pabe_447, retro_pabe_480, retro_pabe_51, retro_pabe_562, retro_pabe_572, retro_pabe_637, retro_pabe_740,
Sarcophilus harrisii ENSSHAG00000006417 ortholog_one2many 1 retrogene
retro_shar_202,
Tarsius syrichta ENSTSYG00000014038 ortholog_one2one 8 retrogenes
retro_tsyr_1462, retro_tsyr_1548, retro_tsyr_206, retro_tsyr_248, retro_tsyr_670, retro_tsyr_737, retro_tsyr_786, retro_tsyr_952,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_302 77.71 52.53
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2. retro_lafr_988 94.59 99.66
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3. retro_lafr_989 94.61 99.66
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4. retro_lafr_992 76.07 54.21
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5. retro_lafr_1025 72.52 88.22
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6. retro_lafr_1098 75.87 95.29
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Download FASTA sequences of all ENSLAFG00000011916 retrocopies