Parental gene: | KNOP1, ENSMMUG00000002707 |
| Aliases: | None |
| Description: | lysine-rich nucleolar protein 1 [Source:HGNC Symbol;Acc:34404] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 20:18685573..18698438(-) |
>ENSMMUG00000002707
ATGATCACCAAGACACACAAAGTAGACCCTGGGGTCCCAGAGAAGAAAAAGAAGAAGAAAGTGGTCAAAGAACCAGGGAC
TCGATACTCAGTTGTAAACAATGATGATTACTTGGCCGATGTTTCTTCTGTAAGAGCCACATCCCCCTCTAAGAGTGTGG
TCCATGGGCAGGCACCTGAGATGCCTCCAGTGAGGAAAAAGAAGAAGAAAAAGACGGGTCTCAGCACCCCTTGCGAGGGG
CATGTGGAACCTGAGACACTGCTGCATGCCAGACGGGCAGAGAAGTCACCCAGCCCCAGGAAGCAGGTGCTTGGCCACTT
GGAGTTCCTCAGTGGGGAGAAGAAAAAGAAGTCACCTCTGGCCATGTCCCATGCCTCTGGGGTGAAAACCTCCCCAGACC
CTAGACAGAGTGAGGAGGAAACCAGAGTTGGCAAGAAGCTCAAAAAACACAAGAAGGAGAAAAAGGGAGCCCGGGATGCC
ACAGCCTTCTCAGTCCAGGACCCTTGGTTCTGCGAGGCCAGGGAGGCCAGGGATGTTGCGGACACCTGCTCAGTGGGAAA
GAAGGATGAGGGACAGGCAGCCTTGGGGCAGAAACGGAAGCGGAAGAGCCCCAGAGAACACAACGGGAAGGTGAAGAAGA
AAAAAAAAATCCACCAGGAGGAAGACACCCTCCCAGGCCACTCCAAGCCCTCCCGGTCCATGGAGAGCAGCCCTAGGAAA
GGAAGTAAAAAGAAGCCAGTCAAAGCTGAGGCTCCGGAATACATCCCCAGAAGTGATGATCCTAAGGCCTCTGCAAAGAA
AAAGATGAAGTCCAAGAAGAAGGTAGAGCAGCCAGTCATCGAGGAGCCAGCTCTCAAAAGGAAGAAGAAGAAGAGGAAAG
AGAGTGGGGTAGCAGGAGACCCTTGGAAGGAGGAAACAGACACGGACTTAGAGGTGGTGTTGGAAAAGAAAGGCAACATG
GATGAGGCGCACATAGACCAGGTGAGGCGAAAGGCCTTGCAAGAAGAGATTGATCGCGAGTCAGGCAAAACGGAAGCTTC
TGAAACCAGGAAGTGGACGGGAACCCAGTTTGGCCAGTGGGATACTGCTGGTTTTGAGAACGAAGACCAGAAACTGAAAT
TTCTCAGACTTATGGGTGGCTTCAAAAACCTGTCCCCTCCTCCGTCCAACCGCGCCCCCAGCACGACTGCAAGACCCAAC
ATGGCCCTCAGCAAGAAGGCGGCTGACAGCCTGCAGCAGAACCTGCAGCGGGACTACGACCGGGCCATGAGCTGGAAGTA
CAGCCACAGCCGCGGAGCCGGCCTTGGTTTCTCCACTGCCCCCAACAAGATCTTTTACATTGACAGGAACGCTTCCAAGT
CAGTCAAGCTGGAAGATTAA
ATGATCACCAAGACACACAAAGTAGACCCTGGGGTCCCAGAGAAGAAAAAGAAGAAGAAAGTGGTCAAAGAACCAGGGAC
TCGATACTCAGTTGTAAACAATGATGATTACTTGGCCGATGTTTCTTCTGTAAGAGCCACATCCCCCTCTAAGAGTGTGG
TCCATGGGCAGGCACCTGAGATGCCTCCAGTGAGGAAAAAGAAGAAGAAAAAGACGGGTCTCAGCACCCCTTGCGAGGGG
CATGTGGAACCTGAGACACTGCTGCATGCCAGACGGGCAGAGAAGTCACCCAGCCCCAGGAAGCAGGTGCTTGGCCACTT
GGAGTTCCTCAGTGGGGAGAAGAAAAAGAAGTCACCTCTGGCCATGTCCCATGCCTCTGGGGTGAAAACCTCCCCAGACC
CTAGACAGAGTGAGGAGGAAACCAGAGTTGGCAAGAAGCTCAAAAAACACAAGAAGGAGAAAAAGGGAGCCCGGGATGCC
ACAGCCTTCTCAGTCCAGGACCCTTGGTTCTGCGAGGCCAGGGAGGCCAGGGATGTTGCGGACACCTGCTCAGTGGGAAA
GAAGGATGAGGGACAGGCAGCCTTGGGGCAGAAACGGAAGCGGAAGAGCCCCAGAGAACACAACGGGAAGGTGAAGAAGA
AAAAAAAAATCCACCAGGAGGAAGACACCCTCCCAGGCCACTCCAAGCCCTCCCGGTCCATGGAGAGCAGCCCTAGGAAA
GGAAGTAAAAAGAAGCCAGTCAAAGCTGAGGCTCCGGAATACATCCCCAGAAGTGATGATCCTAAGGCCTCTGCAAAGAA
AAAGATGAAGTCCAAGAAGAAGGTAGAGCAGCCAGTCATCGAGGAGCCAGCTCTCAAAAGGAAGAAGAAGAAGAGGAAAG
AGAGTGGGGTAGCAGGAGACCCTTGGAAGGAGGAAACAGACACGGACTTAGAGGTGGTGTTGGAAAAGAAAGGCAACATG
GATGAGGCGCACATAGACCAGGTGAGGCGAAAGGCCTTGCAAGAAGAGATTGATCGCGAGTCAGGCAAAACGGAAGCTTC
TGAAACCAGGAAGTGGACGGGAACCCAGTTTGGCCAGTGGGATACTGCTGGTTTTGAGAACGAAGACCAGAAACTGAAAT
TTCTCAGACTTATGGGTGGCTTCAAAAACCTGTCCCCTCCTCCGTCCAACCGCGCCCCCAGCACGACTGCAAGACCCAAC
ATGGCCCTCAGCAAGAAGGCGGCTGACAGCCTGCAGCAGAACCTGCAGCGGGACTACGACCGGGCCATGAGCTGGAAGTA
CAGCCACAGCCGCGGAGCCGGCCTTGGTTTCTCCACTGCCCCCAACAAGATCTTTTACATTGACAGGAACGCTTCCAAGT
CAGTCAAGCTGGAAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .14 RPM |
| SRP007412_brain | 7 .96 RPM |
| SRP007412_cerebellum | 9 .43 RPM |
| SRP007412_heart | 7 .95 RPM |
| SRP007412_kidney | 11 .62 RPM |
| SRP007412_liver | 4 .67 RPM |
| SRP007412_testis | 68 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018032 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009625 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000103550 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005673 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012496 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010065 | ortholog_many2many | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000007151 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000007836 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_798 | 76.11 | 52.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1771 | 71.75 | 56.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000002707 retrocopies