Parental gene:

IMPDH1, ENSMMUG00000014509

Aliases:None
Description:IMP (inosine 5'-monophosphate) dehydrogenase 1 [Source:HGNC Symbol;Acc:6052]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:3:165920125..165937715(-)


>ENSMMUG00000014509
ATGGAGGGGCCACTCACTCCGCCACCGCTGCAGGGAGGCGGAGCCGCCGCTGTTCCGGAGCCCGGAGCCCGGCAACACCC
GGGACACGAGACGGCGGCGCAGCGGTACAGCGCCCGACTGCTGCAGGCCGGCTACGAGCCTGAGAGCGACTTCCTGATTC
TCCCAGGATTCATTGACTTCATAGCTGATGAGGTGGACCTGACCTCAGCCCTGACCCGGAAGATCACGCTGAAGACGCCG
CTGATCTCCTCCCCCATGGACACTGTGACAGAGGCTGACATGGCCATTGCGATGGCTCTGATGGGAGGTATTGGTTTCAT
TCACCACAACTGCACCCCAGAGTTCCAGGCCAACGAGGTGCGGAAGGTCAAGGCAACTTTTGAACAGGGCTTCATCACGG
ACCCCGTGGTGCTGAGCCCCTCGCATACTGTGGGCGATGTGCTGGAGGCCAAGATGCGGCATGGCTTCTCTGGCATCCCC
ATCACCGAGACAGGCACCATGGGCAGCAAGCTGGTGGGCATCGTCACCTCCCGAGACATCGACTTTCTTGCTGAGAAGGA
CCACACCACCCTCCTCAGTGAGGTGATGACGCCAAGGATTGAGCTGGTGGTGGCTCCAGCAGGTGTGACGTTGAAAGAGG
CAAATGAGATCCTGCAGCGTAGCAAGAAAGGGAAGCTGCCTATCGTCAATGATCGTGATGAGCTGGTGGCCATCATCGCC
CGCACTGACCTGAAGAAGAACCGAGACTACCCTCTGGCCTCCAAGGATTCCCACAAGCAGCTGCTCTGCGGGGCAGCTGT
GGGCACCCGTGAGGATGACAAATACCGCCTGGACCTGCTCACCCAGGCAGGCGTCGACGTCATAGTCTTGGACTCGTCCC
AAGGGAATTCGGTGTATCAGATCGCCATGGTGCATTACATCAAACAGAAGTACCCCCACCTCCAGGTGATTGGGGGGAAC
GTGGTGACAGCAGCCCAGGCCAAGAACCTGATTGATGCTGGTGTGGACGGGCTGCGCGTGGGCATGGGCTGCGGCTCCAT
CTGCATCACCCAGGAAGTGATGGCCTGTGGTCGGCCCCAGGGCACTGCTGTGTACAAGGTGGCTGAGTATGCCCGGCGCT
TTGGTGTGCCCATCATAGCCGATGGCGGCATCCAGACCGTGGGGCACGTGGTCAAGGCCCTGGCCCTTGGAGCCTCCACA
GTGATGATGGGCTCCCTGCTGGCTGCCACCACGGAGGCCCCTGGCGAGTACTTCTTCTCAGACGGGGTGCGGCTCAAGAA
GTACCGGGGCATGGGCTCACTGGATGCCATGGAGAAGAGCAGCAGCAGCCAGAAACGATACTTCAGCGAGGGGGATAAGG
TGAAGATCGCACAGGGTGTCTCGGGCTCCATCCAGGACAAAGGGTCCATTCAGAAATTCGTGCCCTACCTCATAGCGGGC
ATCCAACACGGCTGCCAGGATATCGGGGCCCGCAGCCTGTCTGTCCTTCGGTCCATGATGTACTCAGGAGAGCTCAAGTT
TGAGAAGCGGACCATGTCGGCGCAGATCGAGGGTGGCGTCCATGGGCTGCACTCTTACGAGAAGCGGCTGTACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .34 RPM
SRP007412_brain 10 .42 RPM
SRP007412_cerebellum 8 .85 RPM
SRP007412_heart 11 .95 RPM
SRP007412_kidney 9 .62 RPM
SRP007412_liver 16 .59 RPM
SRP007412_testis 9 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017770 ortholog_one2many 1 retrogene
retro_cjac_2045,
Homo sapiens ENSG00000106348 ortholog_one2one 7 retrogenes
retro_hsap_2360, retro_hsap_2368, retro_hsap_2608, retro_hsap_3797, retro_hsap_4005, retro_hsap_4247, retro_hsap_4808,
Gorilla gorilla ENSGGOG00000003963 ortholog_one2one 6 retrogenes
retro_ggor_1790, retro_ggor_1798, retro_ggor_1827, retro_ggor_2551, retro_ggor_2688, retro_ggor_2993,
Macropus eugenii ENSMEUG00000016082 ortholog_one2many 2 retrogenes
retro_meug_2095, retro_meug_542,
Nomascus leucogenys ENSNLEG00000012341 ortholog_one2one 1 retrogene
retro_nleu_2508,
Pongo abelii ENSPPYG00000017976 ortholog_one2one 7 retrogenes
retro_pabe_2133, retro_pabe_2138, retro_pabe_2346, retro_pabe_3102, retro_pabe_3292, retro_pabe_3392, retro_pabe_3736,
Pan troglodytes ENSPTRG00000019660 ortholog_one2one 7 retrogenes
retro_ptro_1087, retro_ptro_1724, retro_ptro_1758, retro_ptro_2575, retro_ptro_2719, retro_ptro_2886, retro_ptro_3198,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_317 92.31 90.75
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2. retro_mmul_1551 85.19 55.85
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Download FASTA sequences of all ENSMMUG00000014509 retrocopies