Parental gene: | MMU.2554, ENSMMUG00000022009 |
| Aliases: | None |
| Description: | cell division control protein 42 homolog [Source:RefSeq peptide;Acc:NP_001244809] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 1:24665867..24680191(+) |
>ENSMMUG00000022009
ATGCAGACAATTAAGTGTGTTGTTGTGGGCGATGGTGCTGTTGGTAAAACATGTCTCCTGATATCCTACACAACAAACAA
ATTTCCATCGGAATATGTACCAACTGTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAACCATATACTCTTG
GACTTTTTGATACTGCAGGGCAAGAGGATTATGACAGATTACGACCGCTGAGTTATCCACAGACAGATGTATTTCTAGTC
TGTTTTTCAGTGGTCTCTCCATCTTCATTTGAAAATGTGAAAGAAAAGTGGGTGCCTGAGATAACTCACCACTGTCCAAA
GACTCCTTTCTTGCTTGTTGGGACTCAAATTGATCTCAGAGATGACCCCTCCACTATTGAGAAACTTGCCAAGAACAAAC
AGAAGCCTATCACTCCAGAGACTGCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAGTATGTGGAGTGTTCTGCACTT
ACACAGAAAGGCCTAAAGAATGTATTTGACGAAGCAATATTGGCTGCCCTGGAGCCTCCAGAACCGAAGAAGAGCCGCAG
GTGTGTGCTGCTATGA
ATGCAGACAATTAAGTGTGTTGTTGTGGGCGATGGTGCTGTTGGTAAAACATGTCTCCTGATATCCTACACAACAAACAA
ATTTCCATCGGAATATGTACCAACTGTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAACCATATACTCTTG
GACTTTTTGATACTGCAGGGCAAGAGGATTATGACAGATTACGACCGCTGAGTTATCCACAGACAGATGTATTTCTAGTC
TGTTTTTCAGTGGTCTCTCCATCTTCATTTGAAAATGTGAAAGAAAAGTGGGTGCCTGAGATAACTCACCACTGTCCAAA
GACTCCTTTCTTGCTTGTTGGGACTCAAATTGATCTCAGAGATGACCCCTCCACTATTGAGAAACTTGCCAAGAACAAAC
AGAAGCCTATCACTCCAGAGACTGCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAGTATGTGGAGTGTTCTGCACTT
ACACAGAAAGGCCTAAAGAATGTATTTGACGAAGCAATATTGGCTGCCCTGGAGCCTCCAGAACCGAAGAAGAGCCGCAG
GTGTGTGCTGCTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 46 .09 RPM |
| SRP007412_brain | 46 .95 RPM |
| SRP007412_cerebellum | 56 .44 RPM |
| SRP007412_heart | 22 .97 RPM |
| SRP007412_kidney | 33 .33 RPM |
| SRP007412_liver | 9 .82 RPM |
| SRP007412_testis | 8 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014707 | possible_ortholog | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005306 | possible_ortholog | 10 retrogenes | |
| Callithrix jacchus | ENSCJAG00000005912 | possible_ortholog | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000006543 | possible_ortholog | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000010374 | possible_ortholog | 3 retrogenes | |
| Equus caballus | ENSECAG00000019180 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004443 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000004853 | ortholog_one2many | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024439 | ortholog_one2one | 5 retrogenes | |
| Macaca mulatta | ENSMMUG00000018854 | other_paralog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021075 | other_paralog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000016078 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015999 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000006699 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008198 | possible_ortholog | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009986 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014261 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001755 | ortholog_one2one | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013536 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005184 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000805 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000679 | possible_ortholog | 11 retrogenes | |
| Tursiops truncatus | ENSTTRG00000005708 | possible_ortholog | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000006919 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_24 | 99.26 | 71.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_349 | 100.00 | 71.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_598 | 85.14 | 91.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_1449 | 69.44 | 73.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_1612 | 89.26 | 78.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmul_1685 | 87.92 | 78.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmul_1900 | 71.60 | 86.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmul_1932 | 91.62 | 86.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000022009 retrocopies