Parental gene: | YBX1, ENSMPUG00000013922 |
| Aliases: | None |
| Description: | Y box binding protein 1 [Source:HGNC Symbol;Acc:8014] |
| Organism: | Ferret (Mustela putorius furo) |
| Coordinates: | GL896903.1:6611409..6630921(-) |
>ENSMPUG00000013922
ATGAGCAGCGAGGCCGAGACCCAGCAGCCGCCCGCCGCCCCCCCCGCCGCCCCCGCCCTCAGCGCTTTGCCCGCCCGCGC
CCTCTCCCAGTCTCTCCACCGACCCCACGGCGCCCTGGCCCGGGGCGGGACTGCGGGAGGAGCCGTAGCTGCCCCAGCCG
GCCCTGATTCTAAGACTTTAGAGTCACTTATTCTAGGAAAAGTGAAGTGGCATCAAATTAATAATGGCTGGTTGTTCTTA
AGAAGATTGAATGACACCAAGGAAGATGTATTTGTACACCAGACTGCCATAAAGAAGAATAACCCCAGGAAGTACCTTCG
CAGTGTAGGAGATGGAGAGACTGTGGAGTTTGATGTTGTTGAAGGAGAAAAGGGTGCGGAGGCAGCAAATGTGACAGGCC
CTGGTGGAGTTCCAGTGCAAGGCAGTAAATATGCAGCAGACCGTAACCATTATAGACGCTATCCACGTCACAGGGGTCCT
CCACACAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGAAAAGAACGAGGGATCGGAAAGTGCTCCCGAAGGCCA
GGCCCAACAGCGCCGGCCCTACCGCAGGCGACGGTTCCCACCTTACTACATGAGGAGACCCTATGGGCGTCGACCACAGT
ATTCCAACCCTCCTGTGCAGGGAGAAGTGATGGAAGGTGCTGACAACCAGGGTGCAGGAGAACAAGGTAGACCAGTGAGA
CAGAATATGTATCGGGGTTATAGACCACGATTCCGCAGGGGTCCTCCTCGCCAAAGACAACCTAGAGAAGATGGCAACGA
GGAAGATAAGGAAAATCAAGGAGATGAGACCCAGGGTCAGCAGCCACCTCAACGTCGGTACCGCCGCAACTTCAATTACC
GACGCAGACGCCCAGAAAACCCTAAACCACAAGATGGCAAAGAGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCC
GCTCCCGAGGCTGAGCAGGGCGGGGCTGAGTAA
ATGAGCAGCGAGGCCGAGACCCAGCAGCCGCCCGCCGCCCCCCCCGCCGCCCCCGCCCTCAGCGCTTTGCCCGCCCGCGC
CCTCTCCCAGTCTCTCCACCGACCCCACGGCGCCCTGGCCCGGGGCGGGACTGCGGGAGGAGCCGTAGCTGCCCCAGCCG
GCCCTGATTCTAAGACTTTAGAGTCACTTATTCTAGGAAAAGTGAAGTGGCATCAAATTAATAATGGCTGGTTGTTCTTA
AGAAGATTGAATGACACCAAGGAAGATGTATTTGTACACCAGACTGCCATAAAGAAGAATAACCCCAGGAAGTACCTTCG
CAGTGTAGGAGATGGAGAGACTGTGGAGTTTGATGTTGTTGAAGGAGAAAAGGGTGCGGAGGCAGCAAATGTGACAGGCC
CTGGTGGAGTTCCAGTGCAAGGCAGTAAATATGCAGCAGACCGTAACCATTATAGACGCTATCCACGTCACAGGGGTCCT
CCACACAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGAAAAGAACGAGGGATCGGAAAGTGCTCCCGAAGGCCA
GGCCCAACAGCGCCGGCCCTACCGCAGGCGACGGTTCCCACCTTACTACATGAGGAGACCCTATGGGCGTCGACCACAGT
ATTCCAACCCTCCTGTGCAGGGAGAAGTGATGGAAGGTGCTGACAACCAGGGTGCAGGAGAACAAGGTAGACCAGTGAGA
CAGAATATGTATCGGGGTTATAGACCACGATTCCGCAGGGGTCCTCCTCGCCAAAGACAACCTAGAGAAGATGGCAACGA
GGAAGATAAGGAAAATCAAGGAGATGAGACCCAGGGTCAGCAGCCACCTCAACGTCGGTACCGCCGCAACTTCAATTACC
GACGCAGACGCCCAGAAAACCCTAAACCACAAGATGGCAAAGAGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCC
GCTCCCGAGGCTGAGCAGGGCGGGGCTGAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000004125 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000007597 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013136 | possible_ortholog | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000028047 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006784 | possible_ortholog | 25 retrogenes |
retro_ogar_1127, retro_ogar_1246, retro_ogar_1350, retro_ogar_1371, retro_ogar_1497, retro_ogar_2011, retro_ogar_2018, retro_ogar_2302, retro_ogar_2359, retro_ogar_2607, retro_ogar_2654, retro_ogar_3170, retro_ogar_3225, retro_ogar_324, retro_ogar_3303, retro_ogar_3316, retro_ogar_3317, retro_ogar_3366, retro_ogar_3416, retro_ogar_3474, retro_ogar_448, retro_ogar_572, retro_ogar_678, retro_ogar_690, retro_ogar_753,
|
| Ochotona princeps | ENSOPRG00000008050 | ortholog_one2one | 11 retrogenes | |
| Sorex araneus | ENSSARG00000007896 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mputfur_215 | 80.17 | 70.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mputfur_293 | 60.99 | 65.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mputfur_1154 | 66.29 | 51.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mputfur_1332 | 63.07 | 71.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mputfur_1436 | 59.79 | 83.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mputfur_1627 | 87.08 | 72.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMPUG00000013922 retrocopies