RetrogeneDB ID: | retro_ogar_3416 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873824.1:624602..625302(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000032767 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000006784 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.03 % |
Parental protein coverage: | 95.95 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PAAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKED |
P.AAPALSAADTKPGTTGSG.GS.....LTS.AP..GDKKVI..KVLG.VKWFNVRN.YGFI.RNDT.ED | |
Retrocopy | PPAAPALSAADTKPGTTGSGTGSSS---LTSVAPDSGDKKVITMKVLGRVKWFNVRNRYGFIKRNDTNED |
Parental | VFVHQTAIKKNNPRKYLRSVGDGETVEFDV-VEGEKGAEAANVTGPGGIPVQGSKYAADRNHYRRYPRRR |
VFVHQTAIK.N.PRKYL.SVG.GETVEFDV.VE.EKGAEAANVTGPGGIPVQGSKYAADRNHYR.YP.RR | |
Retrocopy | VFVHQTAIK-NYPRKYLHSVGNGETVEFDV>VEVEKGAEAANVTGPGGIPVQGSKYAADRNHYRHYPHRR |
Parental | GPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGAD |
GP..NYQQNYQNSES.EKNE..ESAPEGQAQ..RPYRRRRFPPYYMRRPYG.RPQYS.PPVQGEVMEGAD | |
Retrocopy | GPQCNYQQNYQNSESREKNEQLESAPEGQAQ*CRPYRRRRFPPYYMRRPYGCRPQYSKPPVQGEVMEGAD |
Parental | NQGAGEQGRPVRQNMYRGYRPRFRRYGP |
NQG.GEQG.PVRQNMYRGYRPRF.R..P | |
Retrocopy | NQGSGEQGGPVRQNMYRGYRPRFSRDPP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |