Parental gene:

Atpif1, ENSMUSG00000054428

Aliases:Atpif1, Atpi, If1
Description:ATPase inhibitory factor 1 [Source:MGI Symbol;Acc:MGI:1196457]
Organism:Mouse (Mus musculus)
Coordinates:4:132530554..132533659(-)


>ENSMUSG00000054428
ATGGCAGGCTCGGCGTTGGCAGTTCGGGCTCGGTTCGGTGTCTGGGGTATGAAGGTCCTGCAAACCCGAGGCTTCGTCTC
GGACTCGTCGGATAGCATGGATACGGGCGCTGGCTCCATCCGAGAAGCTGGTGGAGCCTTCGGAAAACGAGAAAAGGCTG
AAGAGGATCGGTACTTCCGAGAGAAGACTAAAGAACAGCTGGCTGCCCTGAGGAAACACCATGAAGATGAGATTGACCAC
CATTCGAAGGAGATAGAGCGTCTGCAGAAGCAAATTGAACGCCATAAGAAGAAGATCCAACAACTAAAGAATAATCATTG
A

Library Parental gene expression (RPM)
SRP007412_brain 52 .59 RPM
SRP007412_cerebellum 39 .90 RPM
SRP007412_heart 36 .58 RPM
SRP007412_kidney 77 .60 RPM
SRP007412_liver 7 .54 RPM
SRP007412_testis 58 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032458 ortholog_one2one 2 retrogenes
retro_cfam_1777, retro_cfam_651,
Callithrix jacchus ENSCJAG00000009581 ortholog_one2one 1 retrogene
retro_cjac_1406,
Dasypus novemcinctus ENSDNOG00000015460 ortholog_one2one 1 retrogene
retro_dnov_2592,
Myotis lucifugus ENSMLUG00000000170 ortholog_one2many 1 retrogene
retro_mluc_363,
Mustela putorius furo ENSMPUG00000015536 ortholog_one2one 1 retrogene
retro_mputfur_1570,
Otolemur garnettii ENSOGAG00000010337 ortholog_one2many 2 retrogenes
retro_ogar_116, retro_ogar_268,
Pteropus vampyrus ENSPVAG00000017615 ortholog_one2one 1 retrogene
retro_pvam_817,
Rattus norvegicus ENSRNOG00000013300 ortholog_one2many 1 retrogene
retro_rnor_2655,
Sorex araneus ENSSARG00000010860 ortholog_one2one 1 retrogene
retro_sara_458,
Ictidomys tridecemlineatus ENSSTOG00000020766 ortholog_one2one 1 retrogene
retro_itri_1240,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_908 77.57 100.00
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2. retro_mmus_2516 75.45 100.00
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Download FASTA sequences of all ENSMUSG00000054428 retrocopies