Parental gene:

RPL3L, ENSNLEG00000008850

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397322.1:1917542..1927987(-)


>ENSNLEG00000008850
ATGTCCCACCGGAAGTTTTCCGCCCCTCGGCACGGACACCTGGGCTTCCTGCCCCACAAGCGGAGCCGTCGGCACCGGGG
CAAGGTGAAGACGTGGCCGCGGGATGACCCCAGCCAGCCCGTGCACCTCACGGCCTTCCTGGGCTACAAGGCGGGCATGA
CACACACCCTGCGTGAGGTGCACCGGCCGGGGCTCAAAATTTCCAAACGGGAGGAGGTGGAGGCGGTGACAATTGTAGAA
ACGCCGCCCGTGGTGGTGGTGGGCGTGGTGGGGTATGTGGCCACCCCTCGAGGTCTCCGGAGCTTCAAGACCATCTTTGC
AGAACACCTCAGTGACGAGTGCCGGCGCCGATTCTACAAGGACTGGCACAAGAGCAAGAAGAAAGCCTTCACCAAGGCCT
GCAAGAGGTGGCGGGACACAGACGGCAAAAAGCAGCTACAGAAAGACTTCGCCGCCATGAAGAAGTACTGCAAGGTCATT
CGGGTCATTGTCCATACTCAGATGAAACTGCTGCCCTTCCGGCAGAAGAAGGCCCACATCATGGAGATCCAGCTGAACGG
TGGCACGGTGGCCGAGAAGGTGGCCTGGGCCCAGGCCCGGCTGGAGAAGCAGGTGCCCGTGCACAGCGTGTTCAGCCAGA
GTGAGGTCATTGATGTCATTGCTGTCACCAAGGGTCGAGGCGTCAAAGGGGTCACAAGCCGCTGGCATACCAAGAAGCTG
CCACGGAAGACCCATAAGGGCCTGCGCAAGGTGGCCTGCATTGGTGCCTGGCACCCCGCCCGCGTGGGCTGCTCCATTGC
TCGGGCCGGGCAGAAGGGCTATCACCACCGCACGGAGCTCAACAAGAAGATCTACCGCATCGGCAGGGGGCCGCACATGG
AGGACGGGAAGCTGGTGAAGAACAATGCATCTACCAGCTACGACGTGACTGCCAAGTCCATCACACCGCTGGGTGGCTTC
CCCCACTACGGGGAAGTGAACAACGACTTCGTCATGCTGAAGGGTTGTATTGCTGGTACCAAGAAGCGGGTCATTACGCT
GAGAAAGTCCCTCCTGGTGCACCACAGCCGCCAGGCTGTGGAGAATATTGAGCTCAAGTTCATTGACACCACCTCCAAGT
TCGGCCATGGCCGCTTCCAGACAGCCCAAGAGAAGAGGGCCTTCATGGGCCCCCAAAAGAAGCATCTGGAGAAGGAAAAG
CCAGAGACCTCGGGAGACTTGTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008489 ortholog_one2one 1 retrogene
retro_amel_1881,
Nomascus leucogenys ENSNLEG00000015234 within_species_paralog 2 retrogenes
retro_nleu_1038, retro_nleu_1449,
Pongo abelii ENSPPYG00000006973 ortholog_one2one 1 retrogene
retro_pabe_2854,
Pan troglodytes ENSPTRG00000007617 ortholog_one2one 12 retrogenes
retro_ptro_1439, retro_ptro_1473, retro_ptro_1753, retro_ptro_2150, retro_ptro_2339, retro_ptro_2462, retro_ptro_2501, retro_ptro_2646, retro_ptro_2741, retro_ptro_2767, retro_ptro_3163, retro_ptro_916,
Ictidomys tridecemlineatus ENSSTOG00000012921 ortholog_one2one 2 retrogenes
retro_itri_1344, retro_itri_867,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_1107 77.22 96.81
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2. retro_nleu_1130 58.05 98.77
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3. retro_nleu_1249 65.83 96.81
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4. retro_nleu_1305 75.51 96.81
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5. retro_nleu_1673 67.34 96.81
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6. retro_nleu_1824 69.14 86.00
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7. retro_nleu_2046 67.10 94.84
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8. retro_nleu_2060 59.46 54.55
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9. retro_nleu_3126 75.39 78.62
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Download FASTA sequences of all ENSNLEG00000008850 retrocopies