Parental gene: | RPL3L, ENSSTOG00000012921 |
| Aliases: | None |
| Description: | ribosomal protein L3-like [Source:HGNC Symbol;Acc:10351] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393504.1:2078960..2086264(+) |
>ENSSTOG00000012921
TCCCACCGGAAGTTCTCTGCCCCTCGGCATGGACACCTGGGCTTCCTGCCCCATAAGAGGAGCCGGCGGCACCGGGGCAG
GGTGAAGACGTGGCCAAGGGATGACCCCAGTCAGCCTGTGCACCTCACTGCCTTCCTGGGCTACAAGGCGGGCATGACCC
ACACCCTGCGTGAGGTGCACCGGCCAGGCCTCAAAATTTCCAAACGGGAGGAAGTGGAGGCAGTGACGATTGTGGAGACA
CCACCCCTGGTTGTGGTGGGCGTGGTAGGCTACGTGGCCACCCCTCGAGGCCTGCGGAGCTTCAAGACCATATTTGCAGA
ACACCTCAGTGATGAGTGCCGCCGCCGCTTCTACAAGGACTGGCACAAAAGCAAGAAGAAAGCCTTCACCAAGGCCTGCA
AGAGATGGCGGGATACTGACGGCAAGAAACAGCTCCAGAAGGACTTTGCCGCCATGAAGAAGTACTGCAGAGTCATTCGG
GTCATTGTCCACTCCCAGATGAAGCTGCTGCCCTTCCGGCAGAAGAAGGCCCATATCATGGAGATCCAGCTGAACGGCGG
CACAGTGGCTGAAAAAGTGGCCTGGGCACAGGCTCGGCTGGAGAAGCAGGTGCCAGTGCACAGTGTTTTCAGCCAGAGTG
AGATCATCGATGTCATTGCTGTCACCAAAGGCCGGGGTGTCAAAGGGGTCACAAGCCGCTGGCATACCAAGAAACTGCCT
CGGAAGACCCACAAGGGGCTACGCAAGGTGGCCTGCATTGGTGCCTGGCACCCTGCCCGCGTGGGATGCTCCATTGCACG
GGCTGGGCAGAAGGGCTACCACCACCGCACTGAGCTCAACAAGAAGATCTACCGTATTGGCAGAGGGCTGCACATGGAAG
ACGGAAAGCTGGTCAAGAACAATGCATCCACCAGCTACGATGTGACTGACAAGTCCATCACACCCCTGGGTGGTTTCCCC
CACTATGGGGAAGTCAACAACGACTTTGTCATGCTGAAGGGTTGCATTGCTGGTACCAAGAAGCGGGTCATCACGCTGAG
GAAGTCCCTCCTCGTGCATCACAGCCGCAGGGCCCTGGAGAATATTGAGCTCAAGTTCATTGATACCACCTCTAAGTTTG
GCCATGGCCGCTTTCAGACAGCCCAGGAGAAGAGGGCCTTCATGGGCCCTCAGAAGAAGCATCTGGAAAAGGAAAAGCCA
GAGACCTCGGGAGACTTATAA
TCCCACCGGAAGTTCTCTGCCCCTCGGCATGGACACCTGGGCTTCCTGCCCCATAAGAGGAGCCGGCGGCACCGGGGCAG
GGTGAAGACGTGGCCAAGGGATGACCCCAGTCAGCCTGTGCACCTCACTGCCTTCCTGGGCTACAAGGCGGGCATGACCC
ACACCCTGCGTGAGGTGCACCGGCCAGGCCTCAAAATTTCCAAACGGGAGGAAGTGGAGGCAGTGACGATTGTGGAGACA
CCACCCCTGGTTGTGGTGGGCGTGGTAGGCTACGTGGCCACCCCTCGAGGCCTGCGGAGCTTCAAGACCATATTTGCAGA
ACACCTCAGTGATGAGTGCCGCCGCCGCTTCTACAAGGACTGGCACAAAAGCAAGAAGAAAGCCTTCACCAAGGCCTGCA
AGAGATGGCGGGATACTGACGGCAAGAAACAGCTCCAGAAGGACTTTGCCGCCATGAAGAAGTACTGCAGAGTCATTCGG
GTCATTGTCCACTCCCAGATGAAGCTGCTGCCCTTCCGGCAGAAGAAGGCCCATATCATGGAGATCCAGCTGAACGGCGG
CACAGTGGCTGAAAAAGTGGCCTGGGCACAGGCTCGGCTGGAGAAGCAGGTGCCAGTGCACAGTGTTTTCAGCCAGAGTG
AGATCATCGATGTCATTGCTGTCACCAAAGGCCGGGGTGTCAAAGGGGTCACAAGCCGCTGGCATACCAAGAAACTGCCT
CGGAAGACCCACAAGGGGCTACGCAAGGTGGCCTGCATTGGTGCCTGGCACCCTGCCCGCGTGGGATGCTCCATTGCACG
GGCTGGGCAGAAGGGCTACCACCACCGCACTGAGCTCAACAAGAAGATCTACCGTATTGGCAGAGGGCTGCACATGGAAG
ACGGAAAGCTGGTCAAGAACAATGCATCCACCAGCTACGATGTGACTGACAAGTCCATCACACCCCTGGGTGGTTTCCCC
CACTATGGGGAAGTCAACAACGACTTTGTCATGCTGAAGGGTTGCATTGCTGGTACCAAGAAGCGGGTCATCACGCTGAG
GAAGTCCCTCCTCGTGCATCACAGCCGCAGGGCCCTGGAGAATATTGAGCTCAAGTTCATTGATACCACCTCTAAGTTTG
GCCATGGCCGCTTTCAGACAGCCCAGGAGAAGAGGGCCTTCATGGGCCCTCAGAAGAAGCATCTGGAAAAGGAAAAGCCA
GAGACCTCGGGAGACTTATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008489 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008850 | ortholog_one2one | 9 retrogenes | |
| Pongo abelii | ENSPPYG00000006973 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007617 | ortholog_one2one | 12 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_867 | 65.94 | 56.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1344 | 51.33 | 72.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000012921 retrocopies