Parental gene:

RPL3L, ENSSTOG00000012921

Aliases:None
Description:ribosomal protein L3-like [Source:HGNC Symbol;Acc:10351]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393504.1:2078960..2086264(+)


>ENSSTOG00000012921
TCCCACCGGAAGTTCTCTGCCCCTCGGCATGGACACCTGGGCTTCCTGCCCCATAAGAGGAGCCGGCGGCACCGGGGCAG
GGTGAAGACGTGGCCAAGGGATGACCCCAGTCAGCCTGTGCACCTCACTGCCTTCCTGGGCTACAAGGCGGGCATGACCC
ACACCCTGCGTGAGGTGCACCGGCCAGGCCTCAAAATTTCCAAACGGGAGGAAGTGGAGGCAGTGACGATTGTGGAGACA
CCACCCCTGGTTGTGGTGGGCGTGGTAGGCTACGTGGCCACCCCTCGAGGCCTGCGGAGCTTCAAGACCATATTTGCAGA
ACACCTCAGTGATGAGTGCCGCCGCCGCTTCTACAAGGACTGGCACAAAAGCAAGAAGAAAGCCTTCACCAAGGCCTGCA
AGAGATGGCGGGATACTGACGGCAAGAAACAGCTCCAGAAGGACTTTGCCGCCATGAAGAAGTACTGCAGAGTCATTCGG
GTCATTGTCCACTCCCAGATGAAGCTGCTGCCCTTCCGGCAGAAGAAGGCCCATATCATGGAGATCCAGCTGAACGGCGG
CACAGTGGCTGAAAAAGTGGCCTGGGCACAGGCTCGGCTGGAGAAGCAGGTGCCAGTGCACAGTGTTTTCAGCCAGAGTG
AGATCATCGATGTCATTGCTGTCACCAAAGGCCGGGGTGTCAAAGGGGTCACAAGCCGCTGGCATACCAAGAAACTGCCT
CGGAAGACCCACAAGGGGCTACGCAAGGTGGCCTGCATTGGTGCCTGGCACCCTGCCCGCGTGGGATGCTCCATTGCACG
GGCTGGGCAGAAGGGCTACCACCACCGCACTGAGCTCAACAAGAAGATCTACCGTATTGGCAGAGGGCTGCACATGGAAG
ACGGAAAGCTGGTCAAGAACAATGCATCCACCAGCTACGATGTGACTGACAAGTCCATCACACCCCTGGGTGGTTTCCCC
CACTATGGGGAAGTCAACAACGACTTTGTCATGCTGAAGGGTTGCATTGCTGGTACCAAGAAGCGGGTCATCACGCTGAG
GAAGTCCCTCCTCGTGCATCACAGCCGCAGGGCCCTGGAGAATATTGAGCTCAAGTTCATTGATACCACCTCTAAGTTTG
GCCATGGCCGCTTTCAGACAGCCCAGGAGAAGAGGGCCTTCATGGGCCCTCAGAAGAAGCATCTGGAAAAGGAAAAGCCA
GAGACCTCGGGAGACTTATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008489 ortholog_one2one 1 retrogene
retro_amel_1881,
Nomascus leucogenys ENSNLEG00000008850 ortholog_one2one 9 retrogenes
retro_nleu_1107, retro_nleu_1130, retro_nleu_1249, retro_nleu_1305, retro_nleu_1673, retro_nleu_1824, retro_nleu_2046, retro_nleu_2060, retro_nleu_3126,
Pongo abelii ENSPPYG00000006973 ortholog_one2one 1 retrogene
retro_pabe_2854,
Pan troglodytes ENSPTRG00000007617 ortholog_one2one 12 retrogenes
retro_ptro_1439, retro_ptro_1473, retro_ptro_1753, retro_ptro_2150, retro_ptro_2339, retro_ptro_2462, retro_ptro_2501, retro_ptro_2646, retro_ptro_2741, retro_ptro_2767, retro_ptro_3163, retro_ptro_916,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_867 65.94 56.16
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2. retro_itri_1344 51.33 72.17
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Download FASTA sequences of all ENSSTOG00000012921 retrocopies