Parental gene: | COX4I1, ENSOCUG00000001735 |
| Aliases: | None |
| Description: | cytochrome c oxidase subunit 4 isoform 1, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_001164353] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL019024:93617..97740(+) |
>ENSOCUG00000001735
ATGTTGGCCACCAGGGTGCTGAGCCTCGTCGGCAGGCGGGCGATTTCCACCTCCGTGTGCGTGCGGGCGCACGGTAACGT
TGTGAAGAGCGAGGACTACGCTCTCCCGAGCTACGTGGACCGGCGTGACTACCCCCTGCCCGACGTGGCCCATGTGAAGC
AGCTGTCTGCCAGCCAGAAGGCCCTGAAGGAGAAGGAGAAGGCCCCCTGGGGCAGCCTCACCAGGGACGAGAAGGTCGAG
TTGTATCGCATTCAGTTCAACGAGAGCTTCGCCGAGATGAACCGGGGCACCAATGAGTGGAAGACGGTCGTGGGCACGGC
CCTGTTCTTCATCGGCTTCACCGCCCTCATCCTGATCTGGGAGAAGCACTACGTGTACGGCCCCATCCCGCACACCTTCG
ACAAGGAGTGGGTGGCCATGCAGACCAAGAGGATGCTGGACATGAAGGTGAGCCCCATCCAGGGCTTCTCCGCCAAGTGG
GACTACGACAAGAACGAGTGGAAGAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 308 .39 RPM |
| SRP017611_kidney | 469 .89 RPM |
| SRP017611_liver | 70 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000005479 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000018274 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000016079 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000019921 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000017319 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000017207 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000011722 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000007612 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000131143 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010047 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000014002 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006763 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000031818 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011409 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002129 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000007619 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000008434 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017817 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009682 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_317 | 52.00 | 72.78 | Please wait, loading  |
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| 2. | retro_ocun_469 | 65.79 | 67.46 | Please wait, loading |
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| 3. | retro_ocun_889 | 80.23 | 100.00 | Please wait, loading |
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| 4. | retro_ocun_1238 | 65.22 | 66.27 | Please wait, loading |
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| 5. | retro_ocun_1333 | 76.40 | 94.67 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000001735 retrocopies