Parental gene:

ENSOCUG00000028032

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:4:33533045..33536203(+)


>ENSOCUG00000028032
CAGCGTGAGTGCATCTCCATCCACGTCGGCCAGGCTGGTGTCCAGATCGGCAATGCCTGCTGGGAGCTCTACTGCCTGGA
ACACGGCATCCAGCCCGATGGCCAGATGCCAAGTGACAAGACCATTGGGGGAGGAGACGACTCCTTCAACACCTTCTTCA
GTGAGACGGGCGCTGGCAAGCACGTGCCCAGGGCCGTGTTTGTAGACCTGGAGCCCACGGTCATTGATGAAGTTCGCACC
GGCACCTACCGCCAGCTCTTCCACCCCGAGCAGCTCATCACGGGCAAGGAAGATGCTGCCAATAACTATGCCCGCGGGCA
CTACACCATTGGCAAGGAGATCATTGACCTCGTCCTGGACCGAATTCGCAAGCTGGCTGACCAATGCACGGGCCTGCAGG
GCTTCTTGGTTTTCCACAGCTTTGGTGGGGGAACTGGTTCTGGGTTCACCTCCCTGCTGATGGAACGCCTCTCTGTCGAT
TACGGCAAGAAGTCCAAGCTGGAGTTCTCCATCTACCCAGCCCCCCAGGTTTCCACAGCTGTGGTGGAGCCCTACAACTC
CATCCTCACCACCCACACCACCCTAGAGCACTCTGATTGTGCCTTCATGGTAGACAACGAGGCCATCTATGACATCTGTC
GTAGAAACCTCGATATCGAGCGCCCCACCTACACTAACCTGAACCGCCTTATTAGCCAGATCGTGTCCTCCATCACGGCT
TCCCTGCGGTTTGACGGAGCCCTGAATGTTGATCTGACAGAATTCCAGACCAACCTGGTGCCCTACCCCCGCATCCACTT
CCCTCTGGCCACATACGCCCCCGTCATCTCTGCTGAGAAAGCCTACCACGAGCAGCTTTCTGTAGCAGAGATCACCAATG
CCTGCTTTGAGCCGGCCAACCAGATGGTGAAATGTGACCCTCGCCACGGTAAATACATGGCTTGCTGCCTGCTGTACCGT
GGCGACGTGGTTCCCAAAGATGTCAATGCTGCCATTGCTACCATCAAGACCAAGCGCAGCATCCAGTTTGTGGATTGGTG
CCCCACTGGCTTCAAGGTTGGCATTAACTACCAGCCTCCCACGGTGGTGCCTGGTGGAGACCTGGCCAAGGTGCAGCGAG
CTGTGTGCATGCTGAGCAACACCACAGCCGTGGCCGAGGCCTGGGCTCGCCTGGACCACAAGTTTGACCTGATGTATGCC
AAGCGTGCCTTTGTTCACTGGTACGTGGGGGAGGGCATGGAGGAGGGAGAGTTTTCTGAAGCTCGTGAGGACATGGCTGC
CCTGGAGAAGGATTACGAGGAGGTTGGAGCAGACAGTGCCGAGGGAGAGGATGAGGGTGAAGAATATTAA

Library Parental gene expression (RPM)
SRP017611_brain 56 .40 RPM
SRP017611_kidney 60 .81 RPM
SRP017611_liver 28 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000039992 possible_ortholog 1 retrogene
retro_btau_840,
Canis familiaris ENSCAFG00000008661 possible_ortholog 2 retrogenes
retro_cfam_960, retro_cfam_978,
Choloepus hoffmanni ENSCHOG00000008444 possible_ortholog 2 retrogenes
retro_chof_179, retro_chof_360,
Equus caballus ENSECAG00000009504 possible_ortholog 1 retrogene
retro_ecab_1041,
Erinaceus europaeus ENSEEUG00000004068 possible_ortholog 1 retrogene
retro_eeur_669,
Felis catus ENSFCAG00000024852 possible_ortholog 1 retrogene
retro_fcat_361,
Felis catus ENSFCAG00000028689 possible_ortholog 3 retrogenes
retro_fcat_1802, retro_fcat_254, retro_fcat_798,
Macropus eugenii ENSMEUG00000010779 possible_ortholog 2 retrogenes
retro_meug_1648, retro_meug_2174,
Mus musculus ENSMUSG00000043091 possible_ortholog 1 retrogene
retro_mmus_843,
Oryctolagus cuniculus ENSOCUG00000027812 within_species_paralog 1 retrogene
retro_ocun_197,
Otolemur garnettii ENSOGAG00000009435 possible_ortholog 1 retrogene
retro_ogar_240,
Pteropus vampyrus ENSPVAG00000004646 ortholog_one2many 1 retrogene
retro_pvam_929,
Rattus norvegicus ENSRNOG00000015544 possible_ortholog 3 retrogenes
retro_rnor_1193, retro_rnor_2260, retro_rnor_960,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_111 98.66 99.78
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Download FASTA sequences of all ENSOCUG00000028032 retrocopies