Parental gene:

ENSOPRG00000003513

Aliases:None
Description:None
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_4281:44095..48502(-)


>ENSOPRG00000003513
TTGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGC
TTCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCA
GTCGTGCTGAAGTTAGAACACACTATGATCCCCCTCGGAAGCTTATGGCCATGCAGCGGCCGGGCCCCTATGACAGGCCT
GGGGCTGGCAGAGGTTATAACAGCCTTGGCAGAGGGGCTGGTTTTGAGCGGATGAGACGCGGTGCTTACGGTGGAGGCTA
TGGAGGCTATGATGATTACAATGGCTATAACGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACT
GTTTTTCAGGAATGTCTGACCACAGATATGGGGATGGTGGCTCCACTTTCCAGAGCACCACAGGGCACTGTGTGCATATG
CGGGGATTGCCTTACAGAGCAACTGAGAATGACATTTATAATTTTTTCTCACCCCTCAACCCTGTGAGAGTACACATTGA
AATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTTGAGTTTGCAACTCATGAGGATGCTGTGGCAGCTATGTCAA
AAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCATACGAA
CACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGGAGGCAT
GGGCTTGTCAAACCAGTCCAGTTATGGTGGCCCAGCCAGCCAGCAGCTGAGTGGAGGTTACGGAGGGGGCTATGGCGGCC
AGAGCAGCATGAGTGGCTACGGTAGCCAAGGAACAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCAGCGGTGGGC
GTGAACGGAATGGGAGGGCTGTCTGGCGTGTCCAGTGTGAGTGGTGGCTGGGCAATGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008888 possible_ortholog 2 retrogenes
Bos taurus ENSBTAG00000009389 possible_ortholog 1 retrogene
Canis familiaris ENSCAFG00000000336 possible_ortholog 2 retrogenes
Choloepus hoffmanni ENSCHOG00000003841 possible_ortholog 4 retrogenes
Callithrix jacchus ENSCJAG00000009931 possible_ortholog 1 retrogene
Cavia porcellus ENSCPOG00000001485 possible_ortholog 5 retrogenes
Dipodomys ordii ENSDORG00000005453 possible_ortholog 1 retrogene
Equus caballus ENSECAG00000014429 ortholog_one2one 1 retrogene
Erinaceus europaeus ENSEEUG00000010991 possible_ortholog 1 retrogene
Erinaceus europaeus ENSEEUG00000013364 possible_ortholog 2 retrogenes
Echinops telfairi ENSETEG00000011303 ortholog_one2one 1 retrogene
Felis catus ENSFCAG00000001204 possible_ortholog 2 retrogenes
Homo sapiens ENSG00000169045 possible_ortholog 2 retrogenes
Gorilla gorilla ENSGGOG00000025844 possible_ortholog 2 retrogenes
Loxodonta africana ENSLAFG00000015766 possible_ortholog 2 retrogenes
Myotis lucifugus ENSMLUG00000016625 ortholog_one2many 1 retrogene
Macaca mulatta ENSMMUG00000010843 ortholog_one2one 1 retrogene
Monodelphis domestica ENSMODG00000009436 possible_ortholog 3 retrogenes
Mustela putorius furo ENSMPUG00000000693 possible_ortholog 1 retrogene
Mus musculus ENSMUSG00000007850 possible_ortholog 1 retrogene
Nomascus leucogenys ENSNLEG00000026658 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000012631 possible_ortholog 2 retrogenes
Procavia capensis ENSPCAG00000006715 ortholog_one2one 1 retrogene
Pongo abelii ENSPPYG00000016121 possible_ortholog 1 retrogene
Pteropus vampyrus ENSPVAG00000007670 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000003399 possible_ortholog 1 retrogene
Sorex araneus ENSSARG00000003024 ortholog_one2one 1 retrogene
Sarcophilus harrisii ENSSHAG00000018204 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000014022 possible_ortholog 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000016376 possible_ortholog 2 retrogenes
Vicugna pacos ENSVPAG00000007485 ortholog_one2one 2 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_11 94.89 92.33
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Download FASTA sequences of all ENSOPRG00000003513 retrocopies