Parental gene:

RPL7A, ENSOPRG00000005726

Aliases:None
Description:ribosomal protein L7a [Source:HGNC Symbol;Acc:10364]
Organism:Southern American pika (Ochotona princeps)
Coordinates:scaffold_103140:4..895(+)


>ENSOPRG00000005726
CAAGAGAAGAAGCAGCGGCTGCTGGCCCTGGCCGAGAAGAAGGCGGCCGGCAAGGGGGACGTGCCGACCAAGCGGCCGCC
GGTGCTGCGGGCAGGGGTCAACACGGTGACCACGCTGGTGGAGAACAAGAAGGCACAGCTGGTGGTGATCGCCCACGACG
TGGACCCCATCGAGCTCGTCGTCTTCCTGCCCGCCCTGTGCCGCAAGATGGGCGTCCCCTACTGCATCATCAAAGGCAAG
GCCCGCCTCGGCCGCCTGGTCCACCGCAAGACCTGCACCACCGTGGCCTTCACGCAGGTCAACGCGGAGGACAAGGGTGC
CCTGGCCAAGCTGGTGGAAGCCATCCGGACCAACTACAACGACCGCTACGACGAGATCCGCCGTCACTGGGGAGGCAACG
TGCTGGGCCCCAAGTCGGTGGCCCGCATCGCCAAGCTGGAGAAGGCCAAGGCCAAGGAGCTGGCCACGAAGCTGGGATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011708 possible_ortholog 29 retrogenes
Canis familiaris ENSCAFG00000017680 possible_ortholog 36 retrogenes
Callithrix jacchus ENSCJAG00000014827 possible_ortholog 3 retrogenes
Dipodomys ordii ENSDORG00000006471 ortholog_one2one 3 retrogenes
Equus caballus ENSECAG00000008548 possible_ortholog 2 retrogenes
Erinaceus europaeus ENSEEUG00000000203 possible_ortholog 2 retrogenes
Felis catus ENSFCAG00000005825 possible_ortholog 20 retrogenes
Gorilla gorilla ENSGGOG00000014442 possible_ortholog 48 retrogenes
Loxodonta africana ENSLAFG00000006436 possible_ortholog 2 retrogenes
Macropus eugenii ENSMEUG00000014550 ortholog_one2one 16 retrogenes
Macaca mulatta ENSMMUG00000022341 possible_ortholog 9 retrogenes
Monodelphis domestica ENSMODG00000012754 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000012398 possible_ortholog 13 retrogenes
Mus musculus ENSMUSG00000062647 possible_ortholog 10 retrogenes
Nomascus leucogenys ENSNLEG00000013068 possible_ortholog 22 retrogenes
Otolemur garnettii ENSOGAG00000014027 possible_ortholog 16 retrogenes
Pongo abelii ENSPPYG00000019730 possible_ortholog 52 retrogenes
Rattus norvegicus ENSRNOG00000049097 possible_ortholog 10 retrogenes
Sarcophilus harrisii ENSSHAG00000004337 ortholog_one2one 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000003671 possible_ortholog 3 retrogenes
Tupaia belangeri ENSTBEG00000008595 possible_ortholog 26 retrogenes
Tarsius syrichta ENSTSYG00000005467 ortholog_one2one 20 retrogenes
Tursiops truncatus ENSTTRG00000007645 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_65 53.60 77.36
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2. retro_opri_451 54.67 92.45
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3. retro_opri_629 53.60 77.36
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4. retro_opri_922 78.45 72.33
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Download FASTA sequences of all ENSOPRG00000005726 retrocopies