Parental gene:

RPL7A, ENSTSYG00000005467

Aliases:None
Description:ribosomal protein L7a [Source:HGNC Symbol;Acc:10364]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_4757:6204..11116(+)


>ENSTSYG00000005467
ATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTGAGAAGAGGCCTAAGAACTTTGGCATCGGACAGGACATCCAGCCCAAAAGGGACCTCACCCGCT
TTGTCAAATGGCCTCGGTACATCCGGTTGCAGCGACAAAGAGCCATCCTCTATAAGCGGCTGAAAGTGCCTCCTGCCATT
AACCAGTTCACCCAGGCCTTGGACCGCCAGACAGNNNNNNNNNNNNNNNNNNNNNCCCACAAGTACAGGCCAGAGACCCA
AGAGAAGAAGCAGAGACTGCTGGCCCGGGCTGAGAAGAAAGCTGCTGGCAAAGGGGACGTCCCAACCAAGAGGCCACCTG
TCCTTCGGGCCGGGGTCAACACCATCACCACCTTGGTGGAGAACAAGAAGGCTCAGCTGGTGGTGATTGCACATGACGTG
GATCCCATTGAGCTGGTGGTCTTCCTGCCTGCCCTGTGTCGTAAAATGGGGGTTCCCTACTGCATCATCAAGGGGAAGGC
AAGACTGGGGCGTCTGGTCCACCGGAAGACCTGCACCACTGTCGCCTTCACTCAGGTTAAC

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011708 possible_ortholog 29 retrogenes
Canis familiaris ENSCAFG00000017680 possible_ortholog 36 retrogenes
Callithrix jacchus ENSCJAG00000014827 possible_ortholog 3 retrogenes
Dipodomys ordii ENSDORG00000006471 ortholog_one2one 3 retrogenes
Equus caballus ENSECAG00000008548 possible_ortholog 2 retrogenes
Erinaceus europaeus ENSEEUG00000000203 possible_ortholog 2 retrogenes
Felis catus ENSFCAG00000005825 possible_ortholog 20 retrogenes
Gorilla gorilla ENSGGOG00000014442 possible_ortholog 48 retrogenes
Loxodonta africana ENSLAFG00000006436 possible_ortholog 2 retrogenes
Macropus eugenii ENSMEUG00000014550 ortholog_one2one 16 retrogenes
Macaca mulatta ENSMMUG00000022341 possible_ortholog 9 retrogenes
Monodelphis domestica ENSMODG00000012754 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000012398 possible_ortholog 13 retrogenes
Mus musculus ENSMUSG00000062647 possible_ortholog 10 retrogenes
Nomascus leucogenys ENSNLEG00000013068 possible_ortholog 22 retrogenes
Otolemur garnettii ENSOGAG00000014027 possible_ortholog 16 retrogenes
Ochotona princeps ENSOPRG00000005726 ortholog_one2one 4 retrogenes
Pongo abelii ENSPPYG00000019730 possible_ortholog 52 retrogenes
Rattus norvegicus ENSRNOG00000049097 possible_ortholog 10 retrogenes
Sarcophilus harrisii ENSSHAG00000004337 ortholog_one2one 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000003671 possible_ortholog 3 retrogenes
Tupaia belangeri ENSTBEG00000008595 possible_ortholog 26 retrogenes
Tursiops truncatus ENSTTRG00000007645 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_63 65.07 68.60
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2. retro_tsyr_158 77.31 57.00
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3. retro_tsyr_182 58.68 56.52
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4. retro_tsyr_214 65.74 50.72
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5. retro_tsyr_251 65.73 84.54
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6. retro_tsyr_484 55.97 64.25
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7. retro_tsyr_696 76.92 81.16
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8. retro_tsyr_880 50.64 74.40
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9. retro_tsyr_907 90.40 85.02
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10. retro_tsyr_911 72.63 85.02
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11. retro_tsyr_1009 69.71 83.09
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12. retro_tsyr_1012 72.07 85.02
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13. retro_tsyr_1166 73.08 62.32
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14. retro_tsyr_1168 57.66 52.17
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15. retro_tsyr_1280 84.62 74.40
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16. retro_tsyr_1346 79.10 84.54
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17. retro_tsyr_1798 57.66 52.17
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18. retro_tsyr_1824 57.22 83.57
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19. retro_tsyr_1939 80.68 84.54
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20. retro_tsyr_2039 57.66 52.17
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Download FASTA sequences of all ENSTSYG00000005467 retrocopies