Parental gene: | FKBP4, ENSPPYG00000004149 |
| Aliases: | None |
| Description: | FK506 binding protein 4, 59kDa [Source:HGNC Symbol;Acc:3720] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:2825146..2833275(+) |
>ENSPPYG00000004149
ATGACAGCCGAGGAGATGAAGGCGACCGAGAGCGGGGCGCAGTCGGCGCCGCTGCCCATGGAGGGAGTGGACATCAGCCC
CAAACAGGACGAAGGCGTGCTGAAGGTCATCAAGAGAGAGGGCACAGGTACAGAGATGCCCATGATTGGGGACCGAGTCT
TTGTCCACTACACTGGCTGGCTATTAGATGGCACAAAGTTTGACTCCAGTCTGGATCGCAAGGACAAATTCTCCTTTGAC
CTGGGAAAAGGGGAGGTCATCAAGGCTTGGGACATTGCCATAGCAACCATGAAGGTGGGGGAGGTGTGTCACATCACCTG
CAAACCAGAATATGCCTACGGTTCAGCAGGCAGTCCTCCAAAGATTCCCCCCAATGCCACGCTTGTGTTTGAGGTGGAGT
TGTTTGAGTTTAAGGGAGAAGATCTGACGGAAGAGGAAGATGGCGGAATCATTCGCAGAATACAGACTCGCGGTGAAGGC
TACGCTAAGCCCAATGAGGGCGCTATCGTGGAGGTTGCACTGGAAGGGTACTACAAGGACCAGCTCTTTGACCAGCGGGA
GCTCCGCTTTGAGATTGGCGAGGGGGAGAACCTGGATCTGCCTTATGGTCTGGAGAGGGCCATTCAGCGCATGGAGAAAG
GAGAACATTCCATTGTGTACCTCAAGCCCAGCTATGCTTTTGGCAGTGTTGGGAAGGAAAAGTTCCAAATCCCACCAAAT
GCTGAGCTGAAATATGAATTACACCTCAAGAGTTTTGAAAAGGCCAAGGAGTCTTGGGAGATGAATTCAGAAGAGAAGCT
GGAACAGAGCACCATAGTGAAAGAGCGGGGCACTGTGTACTTCAAGGAAGGTAAATACAAGCAAGCTTTACTACAGTATA
AGAAGATCGTGTCTTGGCTGGAGTATGAGTCTAGTTTTTCCAATGAGGAAGCACAAAAAGCACAGGCCCTTCGACTGGCC
TCTCACCTCAACCTGGCCATGTGTCATCTGAAACTACAGGCCTTCTCTGCTGCCATTGAAAGCTGTAACAAGGCCCTAGA
ACTGGACAGCAACAACGAGAAGGGCCTCTTCCGCCGGGGAGAGGCCCACCTGGCCGTGAATGACTTTGAACTGGCACGGG
CTGATTTCCAGAAGGTCCTGCAGCTCTACCCCAGCAACAAAGCTGCCAAGACCCAGCTGGCTGTGTGCCAGCAGCGGATC
CGAAGGCAGCTTGCCCGGGAGAAGAAGCTCTATGCCAATATGTTTGAGAGGCTGGCTGAGGAGGAGAACAAGGCCAAGGC
AGAGGCTTCCTCGGGAGACCATCCCGCTGACGCAGAGATGAAGGAGGAGCAGAAGAGCAGCACGGCAGGGAGCCAGCCTC
AGGTGGAGACAGAAGCGTAG
ATGACAGCCGAGGAGATGAAGGCGACCGAGAGCGGGGCGCAGTCGGCGCCGCTGCCCATGGAGGGAGTGGACATCAGCCC
CAAACAGGACGAAGGCGTGCTGAAGGTCATCAAGAGAGAGGGCACAGGTACAGAGATGCCCATGATTGGGGACCGAGTCT
TTGTCCACTACACTGGCTGGCTATTAGATGGCACAAAGTTTGACTCCAGTCTGGATCGCAAGGACAAATTCTCCTTTGAC
CTGGGAAAAGGGGAGGTCATCAAGGCTTGGGACATTGCCATAGCAACCATGAAGGTGGGGGAGGTGTGTCACATCACCTG
CAAACCAGAATATGCCTACGGTTCAGCAGGCAGTCCTCCAAAGATTCCCCCCAATGCCACGCTTGTGTTTGAGGTGGAGT
TGTTTGAGTTTAAGGGAGAAGATCTGACGGAAGAGGAAGATGGCGGAATCATTCGCAGAATACAGACTCGCGGTGAAGGC
TACGCTAAGCCCAATGAGGGCGCTATCGTGGAGGTTGCACTGGAAGGGTACTACAAGGACCAGCTCTTTGACCAGCGGGA
GCTCCGCTTTGAGATTGGCGAGGGGGAGAACCTGGATCTGCCTTATGGTCTGGAGAGGGCCATTCAGCGCATGGAGAAAG
GAGAACATTCCATTGTGTACCTCAAGCCCAGCTATGCTTTTGGCAGTGTTGGGAAGGAAAAGTTCCAAATCCCACCAAAT
GCTGAGCTGAAATATGAATTACACCTCAAGAGTTTTGAAAAGGCCAAGGAGTCTTGGGAGATGAATTCAGAAGAGAAGCT
GGAACAGAGCACCATAGTGAAAGAGCGGGGCACTGTGTACTTCAAGGAAGGTAAATACAAGCAAGCTTTACTACAGTATA
AGAAGATCGTGTCTTGGCTGGAGTATGAGTCTAGTTTTTCCAATGAGGAAGCACAAAAAGCACAGGCCCTTCGACTGGCC
TCTCACCTCAACCTGGCCATGTGTCATCTGAAACTACAGGCCTTCTCTGCTGCCATTGAAAGCTGTAACAAGGCCCTAGA
ACTGGACAGCAACAACGAGAAGGGCCTCTTCCGCCGGGGAGAGGCCCACCTGGCCGTGAATGACTTTGAACTGGCACGGG
CTGATTTCCAGAAGGTCCTGCAGCTCTACCCCAGCAACAAAGCTGCCAAGACCCAGCTGGCTGTGTGCCAGCAGCGGATC
CGAAGGCAGCTTGCCCGGGAGAAGAAGCTCTATGCCAATATGTTTGAGAGGCTGGCTGAGGAGGAGAACAAGGCCAAGGC
AGAGGCTTCCTCGGGAGACCATCCCGCTGACGCAGAGATGAAGGAGGAGCAGAAGAGCAGCACGGCAGGGAGCCAGCCTC
AGGTGGAGACAGAAGCGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 187 .60 RPM |
| SRP007412_cerebellum | 173 .65 RPM |
| SRP007412_heart | 50 .39 RPM |
| SRP007412_kidney | 135 .54 RPM |
| SRP007412_liver | 85 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007605 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018746 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011244 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000004478 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010471 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000007405 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002835 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010852 | within_species_paralog | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000012604 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004529 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2607 | 82.59 | 53.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2611 | 84.85 | 57.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3383 | 82.72 | 58.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_3518 | 83.91 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000004149 retrocopies