Parental gene:

ZDHHC20, ENSPPYG00000005201

Aliases:None
Description:zinc finger, DHHC-type containing 20 [Source:HGNC Symbol;Acc:20749]
Organism:Orangutan (Pongo abelii)
Coordinates:13:20500737..20588580(-)


>ENSPPYG00000005201
ATGGCGCCCTGGACGCTGTGGCGCTGCTGCCAGCGCGTCGTGGGCTGGGTGCCGGTGCTCTTCATCACCTTCGTGGTCGT
CTGGTCCTACTACGCGTACGTGGTGGAGCTCTGCGTGTTTACTATTTTTGGAAATGAAGAAAATGGAAAGACCGTTGTTT
ACCTTGTGGCTTTCCATCTGTTCTTTGTTATGTTTGTATGGTCCTATTGGATGACAATTTTCACATCTCCCGCTTCCCCC
TCCAAAGAGTTCTACTTGTCCAATTCTGAAAAGGAACGTTATGAAAAAGAATTCAGCCAAGAAAGACAACAAGAAATTTT
GAGAAGAGCAGCAAGAGCTTTACCTATCTATACCACATCAGCTTCAAAAACTATCAGATATTGTGAAAAATGTCAGCTGA
TTAAACCTGATCGGGCACATCACTGCTCAGCATGTGACTCATGTATTCTTAAGATGGATCATCACTGTCCTTGGGTGAAT
AACTGTGTGGGATTTTCTAATTACAAATTCTTCCTGCTGTTTTTATTGTATTCCCTATTATATTGCCTTTTTGTGGCTGC
AACAGTTTTAGAGTACTTTATAAAATTTTGGACGAATGAACTGACAGATACACGTGCAAAATTCCACGTACTTTTTCTTT
TCTTTGTGTCTGCAATGTTCTTCATCAGCGTCCTCTCACTTTTCAGCTACCACTGCTGGCTAGTTGGAAAAAATAGAACA
ACGATAGAATCATTCCGCGCACCCACGTTTTCCTACGGACCTGATGGAAACGGTTTCTCTCTTGGATGCAGTAAAAATTG
GAGACAAGTCTTTGGTGATGAAAAGAAATATTGGCTACTTCCAATATTTTCAAGCTTGGGTGATGGTTGCAGTTTTCCAA
CTCGCCTTGTGGGGATGGATCCAGAACAAGCTTCTGTTACAAACCAGAATGAATATGCCAGAAGTAGTGGCTCAAATCAG
CCTTTTCCTATCAAACCACTTAGTGAATCAAAAAACCGCTTGTTGGACAGTGAATCTCAGTGGCTGGAGAATGGAGCTGA
AGAAGGCATCGTCAAATCAGGGACAAATAACCATGTAACAGTGGCAATAGAAAATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .51 RPM
SRP007412_cerebellum 40 .13 RPM
SRP007412_heart 7 .22 RPM
SRP007412_kidney 12 .16 RPM
SRP007412_liver 12 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012155 ortholog_one2one 2 retrogenes
retro_chof_1627, retro_chof_2008,
Cavia porcellus ENSCPOG00000011489 ortholog_one2one 1 retrogene
retro_cpor_303,
Equus caballus ENSECAG00000016465 ortholog_one2one 1 retrogene
retro_ecab_683,
Homo sapiens ENSG00000180776 ortholog_one2one 1 retrogene
retro_hsap_1211,
Gorilla gorilla ENSGGOG00000000435 ortholog_one2one 2 retrogenes
retro_ggor_1003, retro_ggor_943,
Macaca mulatta ENSMMUG00000007373 ortholog_one2one 1 retrogene
retro_mmul_1288,
Pongo abelii ENSPPYG00000013950 other_paralog 1 retrogene
retro_pabe_2668,
Pan troglodytes ENSPTRG00000005695 ortholog_one2one 1 retrogene
retro_ptro_829,
Tarsius syrichta ENSTSYG00000003013 ortholog_one2one 1 retrogene
retro_tsyr_998,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1081 93.81 52.88
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Download FASTA sequences of all ENSPPYG00000005201 retrocopies