Parental gene: | PTS, ENSPTRG00000004288 |
| Aliases: | None |
| Description: | 6-pyruvoyl tetrahydrobiopterin synthase [Source:UniProtKB/TrEMBL;Acc:H2R4Y8] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:110131385..110138756(+) |
>ENSPTRG00000004288
ATGAGCACGGCAGGTGGTGGCCGTCGCTGCCAGGCAAAAGTGTCCCGCCGCATCTCCTTCAGCGCGAGCCACCGATTGTA
CAGTAAATTTCTAAGTGATGAAGAAAACTTGAAACTGTTTGGGAAATGCAACAATCCAAATGGCCATGGGCACAATTATA
AAGTTGTGGTGACAGTACATGGAGAGATTGACCCTGCTACGGGAATGGTTATGAATCTGGCTGATCTCAAAAAATATATG
GAGGAGGCGATTATGCAGCCCCTTGATCATAAGAATCTGGATATGGATGTGCCATACTTTGCAGATGTGGTGAGCACGAC
TGAAAATGTAGCTGTTTATATCTGGGACAACCTCCAGAAAGTTCTTCCTGTAGGAGTTCTTTATAAAGTAAAAGTATACG
AAACTGACAATAATATTGTGGTTTATAAAGGAGAATAG
ATGAGCACGGCAGGTGGTGGCCGTCGCTGCCAGGCAAAAGTGTCCCGCCGCATCTCCTTCAGCGCGAGCCACCGATTGTA
CAGTAAATTTCTAAGTGATGAAGAAAACTTGAAACTGTTTGGGAAATGCAACAATCCAAATGGCCATGGGCACAATTATA
AAGTTGTGGTGACAGTACATGGAGAGATTGACCCTGCTACGGGAATGGTTATGAATCTGGCTGATCTCAAAAAATATATG
GAGGAGGCGATTATGCAGCCCCTTGATCATAAGAATCTGGATATGGATGTGCCATACTTTGCAGATGTGGTGAGCACGAC
TGAAAATGTAGCTGTTTATATCTGGGACAACCTCCAGAAAGTTCTTCCTGTAGGAGTTCTTTATAAAGTAAAAGTATACG
AAACTGACAATAATATTGTGGTTTATAAAGGAGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .30 RPM |
| SRP007412_cerebellum | 3 .30 RPM |
| SRP007412_heart | 3 .03 RPM |
| SRP007412_kidney | 6 .33 RPM |
| SRP007412_liver | 7 .89 RPM |
| SRP007412_testis | 2 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000013 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000012437 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014823 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008145 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000150787 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015255 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007299 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000017191 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000003880 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_337 | 59.84 | 85.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2315 | 55.81 | 57.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2979 | 55.81 | 57.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000004288 retrocopies