Parental gene:

Sbds, ENSRNOG00000000888

Aliases:None
Description:Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q5RK30]
Organism:Rat (Rattus norvegicus)
Coordinates:12:31858314..31867472(+)


>ENSRNOG00000000888
ATGTCGATCTTCACCCCCACCAACCAGATCCGACTGACCAATGTAGCCGTGGTGCGGATGAAGCGGGGAGGGAAGCGCTT
CGAAATCGCCTGCTATAAAAACAAGGTCGTCGGCTGGCGGAGTGGAGTGGAAAAAGACCTTGATGAAGTTCTGCAGACCC
ATTCAGTGTTTGTCAATGTTTCCAAAGGTCAGGTTGCCAAGAAGGAAGACCTCATCAGTGCATTTGGGACCGACGACCAG
ACTGAAATCTGCAAGCAGATTCTGACTAAAGGAGAAGTTCAAGTGTCAGATAAAGAACGGCACACACAGCTGGAGCAGAT
GTTTAGGGATATTGCCACCATTGTGGCAGACAAGTGTGTGAACCCGGAAACAAAGAGACCCTACACCGTTATCCTCATCG
AGAGAGCCATGAAGGACATCCACTACTCCGTCAAACCCAACAAGAGCACCAAGCAGCAGGCGCTGGAGGTGATAAAGCAG
CTGAAGGAGAAGATGAAGATCGAGAGGGCGCACATGCGCTTGCGCTTCCTCCTGCCGGTGAACGAGGGAAAGAAGCTGAA
GGAAAAGCTGAAGCCCCTGATGAAGGTCGTGGAGAGTGAGGACTACAGCCAGCAGCTGGAGATCGTATGCCTCATCGACC
CAGGCTGCTTCAGAGAAATTGACGAGCTGATAAAAAAGGAAACGAAAGGCAAGGGTTCTCTGGAAGTGCTCAGTCTGAAA
GACGTGGAGGAGGGAGATGAGAAGTTTGAATGA

Library Parental gene expression (RPM)
SRP017611_liver 20 .51 RPM
SRP017611_kidney 74 .04 RPM
SRP017611_brain 50 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003795 ortholog_one2many 2 retrogenes
retro_chof_1999, retro_chof_623,
Callithrix jacchus ENSCJAG00000004283 ortholog_one2many 1 retrogene
retro_cjac_3984,
Dasypus novemcinctus ENSDNOG00000016904 ortholog_one2many 1 retrogene
retro_dnov_748,
Loxodonta africana ENSLAFG00000008763 ortholog_one2many 1 retrogene
retro_lafr_920,
Monodelphis domestica ENSMODG00000006644 ortholog_one2many 1 retrogene
retro_mdom_2004,
Mus musculus ENSMUSG00000025337 ortholog_one2many 1 retrogene
retro_mmus_950,
Otolemur garnettii ENSOGAG00000009011 ortholog_many2many 1 retrogene
retro_ogar_3368,
Ochotona princeps ENSOPRG00000008721 ortholog_one2many 6 retrogenes
retro_opri_1179, retro_opri_154, retro_opri_363, retro_opri_484, retro_opri_698, retro_opri_957,
Ictidomys tridecemlineatus ENSSTOG00000022203 ortholog_one2many 1 retrogene
retro_itri_1763,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_686 84.21 97.60
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Download FASTA sequences of all ENSRNOG00000000888 retrocopies