Parental gene: | Apoo, ENSRNOG00000046918 |
| Aliases: | Apoo, RGD1565289 |
| Description: | apolipoprotein O [Source:RefSeq peptide;Acc:NP_001186107] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | X:64430817..64534955(+) |
>ENSRNOG00000046918
ATGGTTAAGGTAATTCAGAGATCTGTGGGGCCAGCCAGCCTGAGCCTGCTCACCTTCAGAGTTTATGCAGCACCCAAAAA
GGACTCGCCTCACAAAAGTTACATGAAGATCGATGAGCTCTCACTCTACTCAGTTCCTGAGGGTCAATCTAAATATGTGG
AGGAGCCAAGGACTCAACTTGAAGAAAACATCTCAGAACTCCGACATCGTTGTGAGCCATATACAAATTTGTGTCAGGAA
ATATACTCCCATACTAAACCCAAGGTGGAACACTTTGTCCAGTGGGGAGTAGACAACTATAACTATCTTCAAAATGCACC
TCCTGGATTTTACCCAAGACTCGGAGTTATTGGTTTTGCTGGTTTTGTTGGACTCCTTTTTGCTAGAGGTTCAAAAATAA
AGAAGCTGGTGTATCCTCCTTTCTTCATGGGGTTAGGTGCCTCTGTCTATTACCCACAACAAGCCATCACTATTGCCCAG
ATCACTGGGGAGAAGTTATATGACTGGGGATTACGAGGGTACATAGTTGTAGAAGATTTGTGGAAGCAACATTTTCAGAA
GCCAGGAAATGTGAAGAGTTCACCTGGAAATAAATAG
ATGGTTAAGGTAATTCAGAGATCTGTGGGGCCAGCCAGCCTGAGCCTGCTCACCTTCAGAGTTTATGCAGCACCCAAAAA
GGACTCGCCTCACAAAAGTTACATGAAGATCGATGAGCTCTCACTCTACTCAGTTCCTGAGGGTCAATCTAAATATGTGG
AGGAGCCAAGGACTCAACTTGAAGAAAACATCTCAGAACTCCGACATCGTTGTGAGCCATATACAAATTTGTGTCAGGAA
ATATACTCCCATACTAAACCCAAGGTGGAACACTTTGTCCAGTGGGGAGTAGACAACTATAACTATCTTCAAAATGCACC
TCCTGGATTTTACCCAAGACTCGGAGTTATTGGTTTTGCTGGTTTTGTTGGACTCCTTTTTGCTAGAGGTTCAAAAATAA
AGAAGCTGGTGTATCCTCCTTTCTTCATGGGGTTAGGTGCCTCTGTCTATTACCCACAACAAGCCATCACTATTGCCCAG
ATCACTGGGGAGAAGTTATATGACTGGGGATTACGAGGGTACATAGTTGTAGAAGATTTGTGGAAGCAACATTTTCAGAA
GCCAGGAAATGTGAAGAGTTCACCTGGAAATAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .51 RPM |
| SRP017611_kidney | 32 .31 RPM |
| SRP017611_brain | 13 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012749 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000226 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004909 | possible_ortholog | 8 retrogenes | |
| Cavia porcellus | ENSCPOG00000004197 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006710 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000013441 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000014150 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000000029 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000029070 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014222 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016361 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000025554 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000109 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000079508 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001960 | ortholog_one2one | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002530 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000008734 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012174 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014888 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1022 | 84.85 | 99.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1986 | 78.24 | 84.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2096 | 58.85 | 93.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2308 | 90.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000046918 retrocopies