Parental gene: | APOO, ENSTBEG00000014888 |
| Aliases: | None |
| Description: | apolipoprotein O [Source:HGNC Symbol;Acc:28727] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_3634:204259..267311(+) |
>ENSTBEG00000014888
ATGTTCAAGGTAATCCAGAGGTCCGTGGGGCCAGCCAGCCTGAGCCTGCTCACCTTCAAAGTCTACGCAGCTCCAAAAAA
GGACTCGCCCAACAAAAATGCCATGAAGGTTGATGAGCTTTCACTCTACTCAATTCCTGAGGGGCAATCCAAATATGTGG
AGGAGCCAAGGACCCAACTTGAAGAAAGCATCTCACGGCTTCGACATCACTGCGAGCCATATACAAGTTGGTGTCAGGAA
ATGTACTCCCAAGCTAAGCCCAAGATGCAGAATTTGGTTCAATGGGGGTTAGACAGCTATGAATATCTCCAAAATGCACC
TCCTGGATTTTTTCCAAGACTTGGTGTTATTGGTTTTGCTGGCCTTGTTGGACTCCTTTTGGCTAGAGGTTCAAAAGTAA
AGAAGCTGGTGTACCCACCTGGTTTCATGGGATTAGCTGCCTCTATCTATTATCCACAACAAGCCATTACATTTGCCCAG
GTCAGTGGAGAGAAATTATATGACTGGGGTTTACGAGGATACATAGTCATGGAAGATTTGTGGAAGGAGAACTTTCAAAA
GACAGGAAATGTGAAGAATTCACCCGGAAATAAGTAG
ATGTTCAAGGTAATCCAGAGGTCCGTGGGGCCAGCCAGCCTGAGCCTGCTCACCTTCAAAGTCTACGCAGCTCCAAAAAA
GGACTCGCCCAACAAAAATGCCATGAAGGTTGATGAGCTTTCACTCTACTCAATTCCTGAGGGGCAATCCAAATATGTGG
AGGAGCCAAGGACCCAACTTGAAGAAAGCATCTCACGGCTTCGACATCACTGCGAGCCATATACAAGTTGGTGTCAGGAA
ATGTACTCCCAAGCTAAGCCCAAGATGCAGAATTTGGTTCAATGGGGGTTAGACAGCTATGAATATCTCCAAAATGCACC
TCCTGGATTTTTTCCAAGACTTGGTGTTATTGGTTTTGCTGGCCTTGTTGGACTCCTTTTGGCTAGAGGTTCAAAAGTAA
AGAAGCTGGTGTACCCACCTGGTTTCATGGGATTAGCTGCCTCTATCTATTATCCACAACAAGCCATTACATTTGCCCAG
GTCAGTGGAGAGAAATTATATGACTGGGGTTTACGAGGATACATAGTCATGGAAGATTTGTGGAAGGAGAACTTTCAAAA
GACAGGAAATGTGAAGAATTCACCCGGAAATAAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012749 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000226 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004909 | possible_ortholog | 8 retrogenes | |
| Cavia porcellus | ENSCPOG00000004197 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006710 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000013441 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000014150 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000000029 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000029070 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014222 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016361 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000025554 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000109 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000079508 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001960 | ortholog_one2one | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002530 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000046918 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000008734 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012174 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010147 | within_species_paralog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_96 | 80.65 | 78.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_715 | 63.38 | 69.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_1153 | 81.50 | 87.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_4004 | 82.29 | 96.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_4261 | 79.72 | 71.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tbel_4698 | 68.22 | 64.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000014888 retrocopies