Parental gene:

ENSSTOG00000011101

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393287.1:21027099..21040227(-)


>ENSSTOG00000011101
TACCCTCAGAGAAAGCGTCGTGGTGGAACTGTAAATTCTAGACAAGCACAGAAGCGAACTCGGGAGGCAGCCTCCACCCC
TGAGATTTCCTTGGAAGCAGAACCCATAGAACTCGTGGAAACTGCTGGAGATGAAATCGTGGACCTCACCTGTGAATCTT
TAGAGCCTGTGGTGGTGGACCTGACTCACAATGACTCTATTGTGATTGTTGACGAAAGGAGGAGGCCAAGAAGGAACGCA
AGGAGGCTACGCCAAGACCATCCTGACAGCTGCGTGGTGAGCAGTGATGACGAGGAGTTGTCCAGGGACAGAGATGTGTA
TGTGACCACCCCCACACCCAGAAACGCCAGGGACGAGGGGGCCACAGGACTCAGGCCCTCTGGTACTGTCAGTTGTCCCA
TCTGCATGGACGGATACTCAGAGATTGTGCAGAATGGACGTCTCATTGTCTCTACAGAGTGTGGCCACGTCTTCTGTAGC
CAGTGCCTCCGTGATTCCCTAAAGAATGCTAATACTTGCCCAACTTGTAGGAAAAAGATCAACCACAAACGGTACCACCC
CATTTATATATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014366 possible_ortholog 1 retrogene
retro_amel_77,
Canis familiaris ENSCAFG00000014856 possible_ortholog 1 retrogene
retro_cfam_25,
Dipodomys ordii ENSDORG00000006675 possible_ortholog 2 retrogenes
retro_dord_347, retro_dord_411,
Equus caballus ENSECAG00000024877 possible_ortholog 1 retrogene
retro_ecab_33,
Echinops telfairi ENSETEG00000001683 possible_ortholog 3 retrogenes
retro_etel_469, retro_etel_626, retro_etel_627,
Felis catus ENSFCAG00000004051 possible_ortholog 1 retrogene
retro_fcat_897,
Homo sapiens ENSG00000063978 ortholog_one2many 1 retrogene
retro_hsap_319,
Gorilla gorilla ENSGGOG00000015149 ortholog_one2many 2 retrogenes
retro_ggor_1144, retro_ggor_345,
Loxodonta africana ENSLAFG00000007382 possible_ortholog 1 retrogene
retro_lafr_44,
Microcebus murinus ENSMICG00000001767 ortholog_one2many 1 retrogene
retro_mmur_1265,
Myotis lucifugus ENSMLUG00000005969 possible_ortholog 1 retrogene
retro_mluc_1640,
Mus musculus ENSMUSG00000029110 ortholog_one2many 1 retrogene
retro_mmus_522,
Nomascus leucogenys ENSNLEG00000000160 ortholog_many2many 2 retrogenes
retro_nleu_1713, retro_nleu_37,
Oryctolagus cuniculus ENSOCUG00000004998 ortholog_many2many 2 retrogenes
retro_ocun_1566, retro_ocun_162,
Otolemur garnettii ENSOGAG00000010776 ortholog_one2many 1 retrogene
retro_ogar_2121,
Ochotona princeps ENSOPRG00000004317 possible_ortholog 3 retrogenes
retro_opri_112, retro_opri_783, retro_opri_863,
Procavia capensis ENSPCAG00000004528 possible_ortholog 1 retrogene
retro_pcap_208,
Pongo abelii ENSPPYG00000025865 ortholog_many2many 2 retrogenes
retro_pabe_1240, retro_pabe_36,
Pteropus vampyrus ENSPVAG00000017017 ortholog_one2many 1 retrogene
retro_pvam_167,
Sus scrofa ENSSSCG00000008690 possible_ortholog 1 retrogene
retro_sscr_181,
Tarsius syrichta ENSTSYG00000011244 ortholog_one2many 1 retrogene
retro_tsyr_1606,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_171 88.30 98.95
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2. retro_itri_1108 84.56 70.00
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Download FASTA sequences of all ENSSTOG00000011101 retrocopies