Parental gene:

RPL22L1, ENSTBEG00000000357

Aliases:None
Description:ribosomal protein L22-like 1 [Source:HGNC Symbol;Acc:27610]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3797:621308..623702(-)


>ENSTBEG00000000357
CTCAAGATGGCGCCGCAGAAGGACAAGAAGCCTAAGAGGTCAACCTGGAAGTTTAATTTGGACCTTACTCATCCAGTAGA
AGACGGAATTTTTGACTCCGGCAATTTTGAACAGTTTCTACGGGAAAAGGTTAAAGTCAATGGGAAAACTGGCAACCTTG
GAAATGTAGTTCACATTGAACGCCTCAAGAATAAAATCACAGTTGTTTCTGAGAAACAGTTCTCTAAAAGGTATTTGAAA
TACCTCACCAAGAAATACCTTAAGAAAAACAACCTTCGTGATTGGCTTCGTGTGGTTGCATCTGACAAGGAGACTTACGA
ACTTCGTTACTTCCAGATCAGTCAAGATGAAGAAGGGTCAGAGTCTGAGGATTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004730 ortholog_one2many 1 retrogene
retro_amel_7,
Canis familiaris ENSCAFG00000014955 ortholog_one2one 2 retrogenes
retro_cfam_1410, retro_cfam_773,
Callithrix jacchus ENSCJAG00000002427 ortholog_one2one 1 retrogene
retro_cjac_3983,
Cavia porcellus ENSCPOG00000009215 ortholog_one2one 1 retrogene
retro_cpor_1544,
Equus caballus ENSECAG00000018894 ortholog_one2one 1 retrogene
retro_ecab_728,
Erinaceus europaeus ENSEEUG00000011941 ortholog_one2one 5 retrogenes
retro_eeur_436, retro_eeur_60, retro_eeur_602, retro_eeur_676, retro_eeur_691,
Echinops telfairi ENSETEG00000010658 ortholog_one2one 9 retrogenes
retro_etel_1289, retro_etel_1433, retro_etel_1459, retro_etel_151, retro_etel_1680, retro_etel_335, retro_etel_513, retro_etel_800, retro_etel_936,
Homo sapiens ENSG00000163584 ortholog_one2one 1 retrogene
retro_hsap_2929,
Gorilla gorilla ENSGGOG00000001734 ortholog_one2one 1 retrogene
retro_ggor_2031,
Gadus morhua ENSGMOG00000004077 ortholog_one2one 1 retrogene
retro_gmor_10,
Loxodonta africana ENSLAFG00000013220 ortholog_one2one 2 retrogenes
retro_lafr_1121, retro_lafr_682,
Macropus eugenii ENSMEUG00000009484 ortholog_one2one 1 retrogene
retro_meug_390,
Myotis lucifugus ENSMLUG00000023052 ortholog_one2many 2 retrogenes
retro_mluc_1183, retro_mluc_1588,
Myotis lucifugus ENSMLUG00000027683 ortholog_one2many 8 retrogenes
retro_mluc_1225, retro_mluc_1403, retro_mluc_1690, retro_mluc_1804, retro_mluc_1967, retro_mluc_2383, retro_mluc_2401, retro_mluc_668,
Macaca mulatta ENSMMUG00000022881 ortholog_one2one 2 retrogenes
retro_mmul_1927, retro_mmul_1954,
Mus musculus ENSMUSG00000039221 ortholog_one2one 4 retrogenes
retro_mmus_1380, retro_mmus_2633, retro_mmus_2674, retro_mmus_3631,
Nomascus leucogenys ENSNLEG00000005287 ortholog_one2one 2 retrogenes
retro_nleu_1918, retro_nleu_2266,
Oryctolagus cuniculus ENSOCUG00000014962 ortholog_one2many 2 retrogenes
retro_ocun_1, retro_ocun_256,
Otolemur garnettii ENSOGAG00000012642 ortholog_one2one 2 retrogenes
retro_ogar_1434, retro_ogar_780,
Procavia capensis ENSPCAG00000008704 ortholog_one2one 1 retrogene
retro_pcap_105,
Pongo abelii ENSPPYG00000025900 ortholog_one2one 1 retrogene
retro_pabe_2524,
Pteropus vampyrus ENSPVAG00000011524 ortholog_one2one 1 retrogene
retro_pvam_328,
Rattus norvegicus ENSRNOG00000011817 ortholog_one2many 2 retrogenes
retro_rnor_111, retro_rnor_2152,
Sus scrofa ENSSSCG00000027441 ortholog_one2one 5 retrogenes
retro_sscr_1039, retro_sscr_129, retro_sscr_141, retro_sscr_85, retro_sscr_860,
Ictidomys tridecemlineatus ENSSTOG00000022972 ortholog_one2one 3 retrogenes
retro_itri_1511, retro_itri_1533, retro_itri_492,
Tupaia belangeri ENSTBEG00000009172 within_species_paralog 33 retrogenes
retro_tbel_1047, retro_tbel_1181, retro_tbel_1263, retro_tbel_1422, retro_tbel_1773, retro_tbel_1951, retro_tbel_2121, retro_tbel_2182, retro_tbel_2231, retro_tbel_2429, retro_tbel_2452, retro_tbel_2801, retro_tbel_2923, retro_tbel_3090, retro_tbel_3160, retro_tbel_3265, retro_tbel_3362, retro_tbel_3482, retro_tbel_3719, retro_tbel_3885, retro_tbel_3960, retro_tbel_397, retro_tbel_4199, retro_tbel_4225, retro_tbel_4386, retro_tbel_4437, retro_tbel_4607, retro_tbel_504, retro_tbel_582, retro_tbel_659, retro_tbel_680, retro_tbel_755, retro_tbel_920,
Tursiops truncatus ENSTTRG00000007035 ortholog_one2one 3 retrogenes
retro_ttru_1180, retro_ttru_168, retro_ttru_968,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_226 86.40 99.19
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_tbel_575 91.67 87.10
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_tbel_1135 94.17 83.06
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_tbel_1188 86.89 97.58
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_tbel_2011 91.87 99.19
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_tbel_2073 92.74 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_tbel_2081 88.71 99.19
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_tbel_2325 84.52 66.13
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_tbel_2333 86.73 90.32
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_tbel_2434 83.96 85.48
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_tbel_2936 71.90 95.97
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_tbel_3526 87.90 99.19
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_tbel_3796 81.30 99.19
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_tbel_4070 85.00 94.35
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_tbel_4372 83.20 98.39
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_tbel_4573 90.32 100.00
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_tbel_4681 95.93 99.19
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTBEG00000000357 retrocopies