RetrogeneDB ID: | retro_tbel_1263 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4267:21337..21684(-) | ||
Located in intron of: | ENSTBEG00000008533 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 60.5 % |
Parental protein coverage: | 87.5 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | KKKQVLKFTLDCTHPVEDGIM-DAANFEQF----LQERIKVNGKAGNLG-GGVVTIERSKSKITVTSEVP |
K.K.VLKFTL.C.....DGIM..AANFEQ.....L.ER..V..KA.NLG.GG.V.IERS.SKITVTSEV. | |
Retrocopy | KQKEVLKFTLGCIPQALDGIM>NAANFEQYLIHSL*ERTRVKRKAENLG<GGIVIIERSQSKITVTSEVT |
Parental | FSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYEL-RYFQINQDEEEEE |
F.KRYLKYLTK.Y.K...L.DWL.VVA...E.Y.L....QI..D.E.EE | |
Retrocopy | FYKRYLKYLTKIYSKSHHLHDWLCVVASGNEKYKL<NHSQIDWDKEKEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |