Parental gene:

AP1S2, ENSVPAG00000007642

Aliases:None
Description:adaptor-related protein complex 1, sigma 2 subunit [Source:HGNC Symbol;Acc:560]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_2667:67399..84676(-)


>ENSVPAG00000007642
ATGCAGTTTATGTTGCTTTTTAGTCGTCAGGGAAAGCTTCGACTGCAGAAATGGTATGTCCCATTATCAGACAAAGAGAA
GAAAAAGATCACAAGAGAACTTGTTCAAACCGTTTTAGCACGGAAACCTAAAATGTGCAGCTTTCTTGAATGGCGAGATC
TGAAAATTGTTTACAAAAGATATGCCAGTCTGTATTTTTGCTGTGCTATTGAGGATCAGGACAATGAACTAATTACCCTG
GAAATAATTCATCGTTATGTGGAATTACTTGACAAGTATTTTGGCAGTGTGTGTGAACTTGATATCATCTTTAATTTTGA
GAAGGCTTATTTTATTTTGGATGAGTTTCTTTTGGGAGGGGAAGTTCAGGAAACATCCAAGAAAAATGTCCTTAAAGCAA
TTGAGCAGGCTGATCTACTGCAGGAGAAAACAGAGGCTATGTATCACAACAAGAGTTTCATTGGGTCTAAGAAAGCGTAC
TAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020420 ortholog_one2one 1 retrogene
retro_btau_1308,
Callithrix jacchus ENSCJAG00000004393 possible_ortholog 1 retrogene
retro_cjac_2312,
Dasypus novemcinctus ENSDNOG00000013888 ortholog_one2one 1 retrogene
retro_dnov_1786,
Monodelphis domestica ENSMODG00000017197 ortholog_one2one 7 retrogenes
retro_mdom_1189, retro_mdom_1329, retro_mdom_1441, retro_mdom_1470, retro_mdom_1616, retro_mdom_1987, retro_mdom_903,
Otolemur garnettii ENSOGAG00000011342 possible_ortholog 3 retrogenes
retro_ogar_2038, retro_ogar_265, retro_ogar_3453,
Procavia capensis ENSPCAG00000000733 ortholog_one2one 1 retrogene
retro_pcap_386,
Pteropus vampyrus ENSPVAG00000010218 ortholog_one2one 1 retrogene
retro_pvam_783,
Sorex araneus ENSSARG00000000117 ortholog_one2one 1 retrogene
retro_sara_575,
Sarcophilus harrisii ENSSHAG00000013119 ortholog_one2one 2 retrogenes
retro_shar_651, retro_shar_690,
Sus scrofa ENSSSCG00000012142 ortholog_one2one 1 retrogene
retro_sscr_998,
Ictidomys tridecemlineatus ENSSTOG00000008517 ortholog_one2many 1 retrogene
retro_itri_131,
Tupaia belangeri ENSTBEG00000008834 ortholog_one2one 2 retrogenes
retro_tbel_2173, retro_tbel_4575,
Tarsius syrichta ENSTSYG00000005290 ortholog_one2one 2 retrogenes
retro_tsyr_1953, retro_tsyr_854,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_596 85.44 64.38
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSVPAG00000007642 retrocopies