RetrogeneDB ID: | retro_acar_192 | ||
Retrocopylocation | Organism: | Anole lizard (Anolis carolinensis) | |
Coordinates: | GL343437.1:161592..161783(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V0E1 | ||
Ensembl ID: | ENSACAG00000015183 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.92 % |
Parental protein coverage: | 79.01 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PIIVMSVFWGVVGGVLPWLVPKGPNRGVINTMLVTCAVCCYLFWLIAILA-QLNPLFGPQLKSDI |
PIIVMSVF.GV.G.VL..LV.KGPN.GVINTMLV.CA.CCYLF.LI.ILA.Q.NPL.G.QLKSDI | |
Retrocopy | PIIVMSVFCGVAGSVLQGLVSKGPNWGVINTMLVRCAACCYLFGLIVILA<QWNPLMGSQLKSDI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP009831_adrenal | 0 .00 RPM | 69 .94 RPM |
SRP009831_brain | 0 .00 RPM | 14 .49 RPM |
SRP009831_dewlap | 0 .00 RPM | 22 .61 RPM |
SRP009831_embryo | 0 .00 RPM | 43 .27 RPM |
SRP009831_heart | 0 .00 RPM | 45 .40 RPM |
SRP009831_liver | 0 .00 RPM | 72 .03 RPM |
SRP009831_lung | 0 .00 RPM | 43 .52 RPM |
SRP009831_ovary | 0 .00 RPM | 23 .55 RPM |
SRP009831_skeletal_muscle | 0 .00 RPM | 49 .31 RPM |