RetrogeneDB ID: | retro_chof_718 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_139505:1697..1912(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V0E1 | ||
Ensembl ID: | ENSCHOG00000004421 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 [Source:HGNC Symbol;Acc:863] |
Percent Identity: | 53.95 % |
Parental protein coverage: | 92.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LTVPLIVMSVFWGFVGLLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPL-FGPQLKNETIW |
L..PL.VMSV...F.G..........P.........VTC.VCC.LF.LI.ILA.LNPL...PQ.KNETIW | |
Retrocopy | LVDPLTVMSV---FLGFVGLFVLGSSPRGLTGDDL*VTCLVCCPLFLLIIILAELNPL<LRPQMKNETIW |
Parental | YLKYHW |
YLKYHW | |
Retrocopy | YLKYHW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |