RetrogeneDB ID: | retro_vpac_622 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | scaffold_80:726139..726358(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V0E1 | ||
Ensembl ID: | ENSVPAG00000011996 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 [Source:HGNC Symbol;Acc:863] |
Percent Identity: | 80.82 % |
Parental protein coverage: | 90.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PLIVMSVFWGFVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKY |
PL.VMS.F.G...FLVPWFIPKGPN...IITMLVTCSVCCYL.WLI..LAQLNPLFGPQLK.ETIWYLK. | |
Retrocopy | PLMVMSMF*GIFCFLVPWFIPKGPNQVIIITMLVTCSVCCYLSWLITVLAQLNPLFGPQLKSETIWYLKH |
Parental | HWP |
HWP | |
Retrocopy | HWP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |