RetrogeneDB ID: | retro_amel_450 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192448.1:2605590..2605931(-) | ||
Located in intron of: | ENSAMEG00000003386 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000004205 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.67 % |
Parental protein coverage: | 79.73 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGR-GNAGGMHHHR-INFDKYHPGYFGKVGMRHYHLKRNQSF |
PSRL.KT..LRGHVSH.HG.IG...KH.GGR.G.AGGM.HHR.INFD.YHPGY.G.VG.R.YHLKRNQSF | |
Retrocopy | PSRLKKTQRLRGHVSHSHGCIG---KHAGGR<GPAGGMRHHR<INFDTYHPGYSGEVGVRCYHLKRNQSF |
Parental | CPTVNL-DKLWTLVS-EQTRGNDAKNKTGAAPIIDVVRSGYYKVLGKGKLPK |
.P.VNL..KLWT..S..QT.GN..K.KT.AAP..DVV.SG.Y.VLG.GKLPK | |
Retrocopy | WPVVNL<CKLWTFIS<LQTQGNTTKDKTRAAPVPDVVQSGCYRVLGNGKLPK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |