RetrogeneDB ID: | retro_chof_2284 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_63274:5109..5707(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL6IP1 | ||
Ensembl ID: | ENSCHOG00000007800 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697] |
Percent Identity: | 75.37 % |
Parental protein coverage: | 99.51 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AEGDNRSTNLLAAETASLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGAVSLLFLTIYYLDPSVLSGVS |
AEGD.RSTN.LAAE.ASL.E.LQGWGEVMLMADKV..WE.AWFPPAI.GA.SL.FLT..YLD.SVLSGV. | |
Retrocopy | AEGDKRSTNQLAAENASLGERLQGWGEVMLMADKVRLWEGAWFPPAITGAASLVFLTMFYLDQSVLSGVC |
Parental | CFVMFLCLADYLVPIL-APRIFGSNKWTTEQQQRFHEICSNLIKTRRRAVGWWKRLFTLKEEKPKMYFMT |
C...F......L.......RI..SNKWTTE.Q.R.HEI.SNLIK.R.RAVGWWK.LFTLKEEKPKMYF.T | |
Retrocopy | C---FVMFCAWLATLI>CSRILDSNKWTTEKQKRSHEIGSNLIKIRWRAVGWWKGLFTLKEEKPKMYFLT |
Parental | MIICLAAVAWVGQQVHNLFLTYLIVTFLLLLPGLNQHGIISKYIGMAKREINKLLKQKEKKNE |
MII.LAAVAWVGQQV.NLFLTYLI.TF.LLLPG.NQHG.IS.Y.GMAKREINKLLKQKE.KNE | |
Retrocopy | MIISLAAVAWVGQQVQNLFLTYLIMTFSLLLPGFNQHGMISEYTGMAKREINKLLKQKENKNE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |