RetrogeneDB ID: | retro_chof_1320 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_261922:5..372(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL6IP1 | ||
Ensembl ID: | ENSCHOG00000007800 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697] |
Percent Identity: | 83.46 % |
Parental protein coverage: | 60.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | DYLVPILA-PRIFGS-NKWTTEQQQRF-HEICSNLIKTRRRAVGWWKRLFTLKEEKPKMYFMTMIICLAA |
DY..PILA..RIFGS.NK..TEQQQ.F.HEIC.NLIKTR.RAVGWWK.LFTLKEEKPKMYFM.MII...A | |
Retrocopy | DYFAPILA<TRIFGS<NK*ITEQQQKF>HEICNNLIKTRCRAVGWWKCLFTLKEEKPKMYFMAMIISFVA |
Parental | VAWVGQQVHNLFLTYLIVTFLLLLPGLNQHGIISKYIGMAKREI-NKLLKQKEKKNE |
VAWVG.QVH.LFLTYLIVTFLLLLPGLNQHGIIS..IGMAKREI.NKLLKQKEKKNE | |
Retrocopy | VAWVGEQVHILFLTYLIVTFLLLLPGLNQHGIISNFIGMAKREI<NKLLKQKEKKNE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |