RetrogeneDB ID: | retro_etel_549 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8989:59132..59562(+) | ||
Located in intron of: | ENSETEG00000003370 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL6IP1 | ||
Ensembl ID: | ENSETEG00000020152 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697] |
Percent Identity: | 58.22 % |
Parental protein coverage: | 70.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | IYYLDPSVLSGVSCFV-MFLCLADYLVPILAPRIFGSNKWTTEQQQ-RFHEICSNVVKTRRRAVGWWERL |
........LS...C.V..FLC.A.YLVPIL.PRIFGSN..TTEQQ..RFH.ICSN.V..R..AVG.W..L | |
Retrocopy | VFDVSDELLSRSICLV>VFLCSAVYLVPILEPRIFGSNQRTTEQQK<RFHGICSNLVQPRC*AVGSWKCL |
Parental | FTLKEEKPKMYFVTMIIALAAVAWVGQQVHNLFL-TYLIVTFALLLPGLNQHGIISKYIGMAKREINKLL |
F...EEK.K.YF...I.AL...AWVGQQ.HN.F..TYLIV.F.LLLP.L.Q.G..S.Y..MA.REINK.L | |
Retrocopy | FMMEEEKLKRYFMSTIVALTVLAWVGQQAHNIFS>TYLIVAFTLLLPALKQQGGLSRYNDMASREINKVL |
Parental | KQKEKK |
K.K.K. | |
Retrocopy | KHKAKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |