RetrogeneDB ID: | retro_chof_289 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_6289:24560..24870(-) | ||
Located in intron of: | ENSCHOG00000013321 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SCOC | ||
Ensembl ID: | ENSCHOG00000000604 | ||
Aliases: | None | ||
Description: | short coiled-coil protein [Source:HGNC Symbol;Acc:20335] |
Percent Identity: | 79.25 % |
Parental protein coverage: | 65.16 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | RCILVQV-GPEAS-YSESP-PLPAPQAPXXSSGVLYLGPKS-FL-RMMNADMDAVDAENQVELEEKTRLI |
RC.LVQV..PEAS..S..P.PLPAPQA...SS.VLYL.P.S.FL..MMNA.MDA.D..NQVELEEKTR.I | |
Retrocopy | RCLLVQVLRPEAS<FSRTPSPLPAPQAADHSSRVLYLRPQS<FLPKMMNAGMDAIDSKNQVELEEKTRFI |
Parental | NQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQ |
NQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQ | |
Retrocopy | NQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |